Gene Bcav_0922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0922 
Symbol 
ID7858143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1034636 
End bp1035772 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content71% 
IMG OID643865005 
Producttranscriptional regulator, LuxR family 
Protein accessionYP_002880945 
Protein GI229819419 
COG category[K] Transcription 
COG ID[COG2771] DNA-binding HTH domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCCCG CGCGGATGAT GGACGTCATG TCACGGCGCA GTGTCGCGCG CGGCGGACTG 
CAGGAGCGGG TGCGCCGCGT GTGCGTGCGG GCGCAGGAGC CCCTCGAGCT GCTCGAGAAT
GTCGCTTCGG AGGTCCACGC CGAGATCCCC TACGACGCCT CGGGCTGGAT GATCGTCGAC
CCCGACACGA TGCTCATCAC CGGGATCTAC GCCGAGAACG TCGAGCGTGA GCGCAATCTC
GCGCTGGTCG AGTGCGAGCT GGCCGAGGAC GACGTGAACA AGTTCTGGGA GATCGCGAGT
CGCGAGTCGC CCGCGGCATC CCTGAGCTCG TCGACCGACG GTGACCTGCG GCGCAGCGTC
CGGTGGCGGC GATGCTACGA GCCCGCCGGA TACGGCGACG AGCTGCGTGC GGTATTCGCC
TCGGCCGGCG CGGTATGGGG CAACGTCTGC ATCAGCCGCC TGTCGGAGCG ACAGGACTTC
TCGCCGGACG AGGTCGATGT GGTAGCCCGG CTTGCCCCGC ACATCGGCTC CGGGATTCGG
GCGTGCATCC TCCTGGCAGA GACGGCCGAC AGGCATCGCC CGGCGGGCGG GGGGACCGAG
TCACAGCCCG GGCTCATGGT TGTGGCCGAC GACGGCAGCG TTGAATCGAT GACGCCGGAG
GCCGCTCGCT GGGTCGGCTC GGTCGAGGAC GAGGCGCTCG ACACGTCCAT CGTTCTGCAC
GAGGTCGTCC ACCGCGCCAG GGCGCTGGCG GACGATGGAG ACGCCGGGCC GCCGGCGTGC
GCCCATGTGC GGGCGCGCTC CGGTGAGTGG ATCGTCGTCC GCGGCGCCCG GCTCGCCGAC
CGGCCGGCCG GGAGGGGAGG GACCGCCCTC GTCCTCGAGC CGGCCAGGAG GTCCGACATC
GCACCGATGC TGCTCCGGCT TCACCAGCTC ACGCGGCGGG AGCAGGAGGT CACCCAGCTG
CTGCTGCTGG GGATGGCGAC CGGGGAGATC GCGCACCGGC TGTGGATCAC TCCGGAGACG
CTGCGCGGTC ACGTGAAGGC GGTCTTCGCG AAGCTCGGGG TCGGCAGTCG GCCCGAGCTC
GCCGCGCTGC TGTCCGCGCA GCCGGTGGTA CGCGTTCCCG CGGCTGTGAG GCGGTGA
 
Protein sequence
MVPARMMDVM SRRSVARGGL QERVRRVCVR AQEPLELLEN VASEVHAEIP YDASGWMIVD 
PDTMLITGIY AENVERERNL ALVECELAED DVNKFWEIAS RESPAASLSS STDGDLRRSV
RWRRCYEPAG YGDELRAVFA SAGAVWGNVC ISRLSERQDF SPDEVDVVAR LAPHIGSGIR
ACILLAETAD RHRPAGGGTE SQPGLMVVAD DGSVESMTPE AARWVGSVED EALDTSIVLH
EVVHRARALA DDGDAGPPAC AHVRARSGEW IVVRGARLAD RPAGRGGTAL VLEPARRSDI
APMLLRLHQL TRREQEVTQL LLLGMATGEI AHRLWITPET LRGHVKAVFA KLGVGSRPEL
AALLSAQPVV RVPAAVRR