Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0922 |
Symbol | |
ID | 7858143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 1034636 |
End bp | 1035772 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643865005 |
Product | transcriptional regulator, LuxR family |
Protein accession | YP_002880945 |
Protein GI | 229819419 |
COG category | [K] Transcription |
COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGCCCG CGCGGATGAT GGACGTCATG TCACGGCGCA GTGTCGCGCG CGGCGGACTG CAGGAGCGGG TGCGCCGCGT GTGCGTGCGG GCGCAGGAGC CCCTCGAGCT GCTCGAGAAT GTCGCTTCGG AGGTCCACGC CGAGATCCCC TACGACGCCT CGGGCTGGAT GATCGTCGAC CCCGACACGA TGCTCATCAC CGGGATCTAC GCCGAGAACG TCGAGCGTGA GCGCAATCTC GCGCTGGTCG AGTGCGAGCT GGCCGAGGAC GACGTGAACA AGTTCTGGGA GATCGCGAGT CGCGAGTCGC CCGCGGCATC CCTGAGCTCG TCGACCGACG GTGACCTGCG GCGCAGCGTC CGGTGGCGGC GATGCTACGA GCCCGCCGGA TACGGCGACG AGCTGCGTGC GGTATTCGCC TCGGCCGGCG CGGTATGGGG CAACGTCTGC ATCAGCCGCC TGTCGGAGCG ACAGGACTTC TCGCCGGACG AGGTCGATGT GGTAGCCCGG CTTGCCCCGC ACATCGGCTC CGGGATTCGG GCGTGCATCC TCCTGGCAGA GACGGCCGAC AGGCATCGCC CGGCGGGCGG GGGGACCGAG TCACAGCCCG GGCTCATGGT TGTGGCCGAC GACGGCAGCG TTGAATCGAT GACGCCGGAG GCCGCTCGCT GGGTCGGCTC GGTCGAGGAC GAGGCGCTCG ACACGTCCAT CGTTCTGCAC GAGGTCGTCC ACCGCGCCAG GGCGCTGGCG GACGATGGAG ACGCCGGGCC GCCGGCGTGC GCCCATGTGC GGGCGCGCTC CGGTGAGTGG ATCGTCGTCC GCGGCGCCCG GCTCGCCGAC CGGCCGGCCG GGAGGGGAGG GACCGCCCTC GTCCTCGAGC CGGCCAGGAG GTCCGACATC GCACCGATGC TGCTCCGGCT TCACCAGCTC ACGCGGCGGG AGCAGGAGGT CACCCAGCTG CTGCTGCTGG GGATGGCGAC CGGGGAGATC GCGCACCGGC TGTGGATCAC TCCGGAGACG CTGCGCGGTC ACGTGAAGGC GGTCTTCGCG AAGCTCGGGG TCGGCAGTCG GCCCGAGCTC GCCGCGCTGC TGTCCGCGCA GCCGGTGGTA CGCGTTCCCG CGGCTGTGAG GCGGTGA
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Protein sequence | MVPARMMDVM SRRSVARGGL QERVRRVCVR AQEPLELLEN VASEVHAEIP YDASGWMIVD PDTMLITGIY AENVERERNL ALVECELAED DVNKFWEIAS RESPAASLSS STDGDLRRSV RWRRCYEPAG YGDELRAVFA SAGAVWGNVC ISRLSERQDF SPDEVDVVAR LAPHIGSGIR ACILLAETAD RHRPAGGGTE SQPGLMVVAD DGSVESMTPE AARWVGSVED EALDTSIVLH EVVHRARALA DDGDAGPPAC AHVRARSGEW IVVRGARLAD RPAGRGGTAL VLEPARRSDI APMLLRLHQL TRREQEVTQL LLLGMATGEI AHRLWITPET LRGHVKAVFA KLGVGSRPEL AALLSAQPVV RVPAAVRR
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