Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0899 |
Symbol | |
ID | 7860264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 1002740 |
End bp | 1006978 |
Gene Length | 4239 bp |
Protein Length | 1412 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 643864981 |
Product | DNA helicase |
Protein accession | YP_002880922 |
Protein GI | 229819396 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.403081 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGGTG AGGCGGGCGA ACCCACCGAG CCGGGTGCCG GCCGGGACCA CGAGGCCGAG GCGGCCACGC GAGCGGCGGC GGTCTCGGAC GCCGTGGCGC GCTGGCGCGA GGCGCTGACC GCCCTCGGTG GGGACAGTGC ACTGGCCGAC ATCGACGCCC TGGGCGACGC CGGCCTCGAC CTGTCCGCCG CCCACCCCGG CGGCATCGCG CAGCTGTTCG CGGGCCGCCC GACCCGGCTG TCCAACCTCG TCCGCGAGCC GGGTGCGCTG GGGACCGCCC GCCGTCGGGC GCGTCTCGTG CTGGCCCGGT CCGACGAGCT GGCGCAGCGT TACGGACTGG CCGCCACCTC CGTCGCGCTC GGCGTGGCGA CGTGGACGCC GGCGGACCCG GAAGGTCGGG CGGCGTCGGA GGGCGAGGGC GAGCTCGCCG CCGCAGGGTC GGAGCCCTGG CGGGCGCCGG TGCTGCTGCG GCCCGTCCAC CTCTCGGTGC CTGCGCACGG CACCGACGCC GAGGTGGAGC TGGCGCTGTC GCCCCGCATC GAGATCAACC CGGTGCTCGC GCGGGCGCTC GGTGGCGGCG CCGGCCGGCT CGAGCGGCTC GTCGTCGAGC GGACGCAGCG CGGCGCCCTC GACCTGCGGG CGCTGCTCGC CGAGGTCGAC GAGATCCTCG CGACGGCACT TCCCGGAGTC CGCGTCGACG AGCGGGTGGT GCTCGGCTCG TTCGCCCACC CGGGGCAGCT CCTCGCGGAG GACCTGGACG CGGAGCGGCT CGCCGGGCAC GACGTCGTCG CGGCGCTCGC GGGCGACGAC GAGGCGGCCG CGGCACTCGA GTCGGCGCTC CCGCCCGCCG CCGACGGCGA CCGTGATCCC GCCCAGGAAC GGGGCGTCGG TGACCTCGAC GCCGGCCAGC GTCGGGTGCT CGACGCCGTG GCGATGGGTG GGCACCTGTT CGTGGACGCG CCGCCGGGCG CCGACGTCGT CGGCACCATC ACGGCGATCA TCGCCGACGC CGCCGCGTCC GGGCGGTCCG TGCTGCACGT GCCGGGCACG CGTCGGGCCG GTGCGGCGCT CGCCGAGACC GTCGCCGCCG TCGGCATCGG CGAGCTCGTG CTCGACCTCA CGTCCGACGC CGACCGCTCC CGCGTGGCCG CGGAGGCCTT CGGCGCACGG ATGGCGGCAC CGGTCCCCGA GGTGGACGAC GACGCCGTCG CCGCGCTGCG TCTCGAGCTG GGGCAGGTGC ACCGGAGCCT CGTCGCCCAC GTGCGCGCCC TGCACGAGGT CCGGAGCAGG TGGGGCGTCT CCGCCTACGA CGCGCTCCAA GCGCTCGCCG CGCTGACGGC CCAGCGACCG GGGCCACGCA CCGAGGTGCG GCTCGACGCC GCGATCCTCG AACGACTCGA CGCGCCGGCC CGGAAGCAGG CCGGCGAGGA GCTCGCGCGA GCCGGTGCGC TCGGCGCGTT CCAGCTGCGG AGGGCCGACA GCCCCTGGTA CGGCGTCCGT CTCGCCAGCG CCGAGGAGGC CACCCGCGCC GTCGAGACGG TCAACCGTCT CGCGGCCCGC ACGCTGCCCG GTCTGAGGCG CCAGATCGCG GCGGCCGCCG CGCAGACGGG GCTCGCTCCG GCGTCCAGCC TCGCGCAGTG GCGCGAGCAG CTGACGATGC TCGAGGGTGT GCGGCGCGCG CTCGACGTGT TCCAGCCGAT GGTCTTCGAA CGTTCCGCTG CTGACCTCGT CGCGGCGACA GCCCCACGGG CGGAGCGGGC GCAGCACGGT GCGCCGCTGC CCTGGCGCAC GCGCCGCCGC CTGCGCCGCC AGGCGAAGGA CCTGCTGCGA CCGGGGCGGC ACGTCACCGA CCTGCACGCA GAGCTCGTGC ACGTCCAGGC GCAGCGGGAC GTCTGGCGCC TGCACTGCCC CGCGGGCGGA TGGCCGCGGC TGCCGGAGTC GCTCGACGCG CTGGAGACGG CCACGCAGGA CGTGAGCGAC GCCGTCGCGT CGGTCGAGGA GGTCCTCGCG CCCACGCTGC CCGCGGGAGA CGGGGCGACC TCGCTCGTCA CCCTGCCCCT CGCCGGGCTG GAGGACCACC TCCTCGCGCT CGCGGCCGAC GAGTCGGTCG CCCGCGCCCT GCCCGAGCGG ACGGCCGCGC TCGCCCGCCT CATCGACGTC GGACTCGGTG ACCTCGTCGA CGACCTGGCG GACCGCCGGG TGCCGACGTC GTTGGTGGGT GCCGAGCTCG ACCTCGCGTG GTGGGCGAGC GTGCTCGACG TCGTGCTCGC CTCCGACTCC GCGCTGGCGA ATGCCGGTGG CGAGGACTTC CTCGCCCTCA CCGACCGCTG GCGTGCGCTC GACCGGGGCC AGGTCGCGAG CCTGGTCGGC CCGGTCCGCC GTGCCACCGT GCGGCACCTG CGGGGCGTCA TGCGCGAGCA CGAGGAGCAG GCGCAGGGTC TGTACGCGCT GGCCCGGGAG GCTCGCCGCG GGAGCGGTGA CACGTTCGAC CTGCGGGAGA TGGCGCGCGT GTTCGCCCCG GTGGCCGGGG CCGTCGTGCC GTGCTGGAGC GTGCCGCCGA TGCTCGTGCC GCAGGTGCTC GAGCCGGGTG CGCGCGTCGA TCTGCTCGTG CTCGACAACG TGCAGAACCT GCCCACCGAA CAGGCCGTCG CGGCCATCGG CCGGGCCCGT CAGGTCGTCG TGCTGGGCGA CTCCCGGCGT GCCGGTGGCG GCGTCGTCGA CGCCCTCGCC CCGCTGCTGC CGCGGCTCAC GCTGCCCACC GACCGGGGCG AGGAGGACGA GCACCTGACG GCGTTCCTGG TCCGCCACGG CTACGCCGAG GTGCTCGTCC CGGTCCCCGC ACCGCCGGGG CCGAGCCGGA TCCGGCTCGA CCTCGTCGAC GGCCGCGGCC TCGCCGCCCC GGGCGCTGAC GCCGTCGAGA GCGTGGCCGA GGAGGTCGCA CGGGTGGTCG ACGTGGTCGT GGACCACGCG CTCACGCGCC CGGAGGAGTC CCTCGCCGTC GTCGCCCTCA ACGCCCGCCA CGCCGATCGC GTCCGCGAGG CGGTCGCCGG CACCGTGGCC CACAGTCCTG CGGTGGCCGA GTTCTTCGAC GCCGCCCGGC CCGAGCCGTT CACCGTGGTG GACGTGGAGG CGGCGTCCGG GCTGCGCCGC GACGCCGTCG TGCTCACGCT CGGGTTCGGC AAGACGCCGC ACGGGAGGGT GCTGCACCGG TTCGGTGCCG TGAGCGGCCC GCGTGGCGCG TCGCTGCTCG TGGAGGCGAT CGCCGCGAGC CGCAGCAGGC TCGTCGTCGT CAGCTGCATC GCGCCGGACG AGTTCGACCG CGGGCGCCTG CGCTCCGAGG GTCCGCTGCT GCTCCACGAC CTGCTCGAGT TCGCCGCGCT GGACGGCGCG TTGCCCCCGT CCACCGACGA CGCGCCCCCC GACCCCCTGC TGGTCGACCT GGCCGAGCGG CTCTGGCGGA TGGGGCTCAC GGTCGTGCCG CAGTACGGAC CGGCGGGCGG GGTCCGCGTC CCGCTCGCGA TCGGCCACCC GGAGCTTCCG GGGCGGCTGC TGCTCGCCGT CCTCACCGAC GACGCGGAGT ACGTGGCCTC GCCGAGCCTG CGCACCCGGG ACAGACACCG CATCGAGCGG CTCGAGCGTC GCGGCTGGAC GGTGCGGATG CTCCCGTCGA CCGCCGTGTT CATGGACCCG CAGGGTGAGG CTCAACGCAT CTGCGACCTG GTCACCGAGC TGGTCCGGTC CCGCCGCACG ACCGGTTCCG TGCACGTTCC GGTCGTCGGG CCGCCGGAGC GGCTCGACGA CGAGGAAGGC CCCGACGAGG ACGTGCCCGA CGTCGCCGAC CCCGCCCAGA CCGGGACGTC GGCGGCGCCC GCCCGGCCGG ACCTCGAGGC CGGCCTGCCG ATCGGCGCCT ACACCGACGA CCAGCTCGAC GAGCTGCTCC GGTGGCTCGA CGAGGGTGAG CCACGCGAGG ACGAGGACCT GCTCGCCGCC GTGCGCACCG AGCTCGGCAT CGCCCGCCGC GGTGGGCGGG TGGACGCCGT GCTCGGAGCA GCGCTCGCGC GCTTGCGCAC GGGCGAGCGC CGCCGTCCGA CGACGCCCGC GGCTCCTGCG ACGCCGGCAT CCACGGAGCC GCCGGTCATC CCGGACCGCG CCTGGGAGGA CGTCGACCGG GCTTGGGGAG ACGACGACGC GGACGACGAC GACCGGTTGC GCCGCGAGCG CCCACCGCAC TGGGGCTGA
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Protein sequence | MTGEAGEPTE PGAGRDHEAE AATRAAAVSD AVARWREALT ALGGDSALAD IDALGDAGLD LSAAHPGGIA QLFAGRPTRL SNLVREPGAL GTARRRARLV LARSDELAQR YGLAATSVAL GVATWTPADP EGRAASEGEG ELAAAGSEPW RAPVLLRPVH LSVPAHGTDA EVELALSPRI EINPVLARAL GGGAGRLERL VVERTQRGAL DLRALLAEVD EILATALPGV RVDERVVLGS FAHPGQLLAE DLDAERLAGH DVVAALAGDD EAAAALESAL PPAADGDRDP AQERGVGDLD AGQRRVLDAV AMGGHLFVDA PPGADVVGTI TAIIADAAAS GRSVLHVPGT RRAGAALAET VAAVGIGELV LDLTSDADRS RVAAEAFGAR MAAPVPEVDD DAVAALRLEL GQVHRSLVAH VRALHEVRSR WGVSAYDALQ ALAALTAQRP GPRTEVRLDA AILERLDAPA RKQAGEELAR AGALGAFQLR RADSPWYGVR LASAEEATRA VETVNRLAAR TLPGLRRQIA AAAAQTGLAP ASSLAQWREQ LTMLEGVRRA LDVFQPMVFE RSAADLVAAT APRAERAQHG APLPWRTRRR LRRQAKDLLR PGRHVTDLHA ELVHVQAQRD VWRLHCPAGG WPRLPESLDA LETATQDVSD AVASVEEVLA PTLPAGDGAT SLVTLPLAGL EDHLLALAAD ESVARALPER TAALARLIDV GLGDLVDDLA DRRVPTSLVG AELDLAWWAS VLDVVLASDS ALANAGGEDF LALTDRWRAL DRGQVASLVG PVRRATVRHL RGVMREHEEQ AQGLYALARE ARRGSGDTFD LREMARVFAP VAGAVVPCWS VPPMLVPQVL EPGARVDLLV LDNVQNLPTE QAVAAIGRAR QVVVLGDSRR AGGGVVDALA PLLPRLTLPT DRGEEDEHLT AFLVRHGYAE VLVPVPAPPG PSRIRLDLVD GRGLAAPGAD AVESVAEEVA RVVDVVVDHA LTRPEESLAV VALNARHADR VREAVAGTVA HSPAVAEFFD AARPEPFTVV DVEAASGLRR DAVVLTLGFG KTPHGRVLHR FGAVSGPRGA SLLVEAIAAS RSRLVVVSCI APDEFDRGRL RSEGPLLLHD LLEFAALDGA LPPSTDDAPP DPLLVDLAER LWRMGLTVVP QYGPAGGVRV PLAIGHPELP GRLLLAVLTD DAEYVASPSL RTRDRHRIER LERRGWTVRM LPSTAVFMDP QGEAQRICDL VTELVRSRRT TGSVHVPVVG PPERLDDEEG PDEDVPDVAD PAQTGTSAAP ARPDLEAGLP IGAYTDDQLD ELLRWLDEGE PREDEDLLAA VRTELGIARR GGRVDAVLGA ALARLRTGER RRPTTPAAPA TPASTEPPVI PDRAWEDVDR AWGDDDADDD DRLRRERPPH WG
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