| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0886 |
|---|
| Symbol | |
|---|
| ID | 7860250 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 985606 |
|---|
| End bp | 986826 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 643864967 |
|---|
| Product | ornithine aminotransferase |
|---|
| Protein accession | YP_002880909 |
|---|
| Protein GI | 229819383 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
|---|
| TIGRFAM ID | [TIGR01885] ornithine aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.22367 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCG ACGTGCGCCT CGCCACGGGG TCCACGGCCC CCGGCCGGGA GGTCCTCGCC
CACAACTACG CACCCCTGCC GGTCACGCTG CACTCCGGCG ACGGCGCCTG GGTGCGCGAT
GCGCAGGGCC GCGCCTACCT GGACTTCCTC GCCGGGTACT CGGCGCTCAA CTTCGGTCAC
GGCCACCCCG CCCTGCTCGC GGCCGCCCAC GACCAGCTGG ACCGCCTGAC CCTGACCTCG
CGGGCCTTCG ACCACGACCT GCTCGTCCCG TTCGCCGACG CCGTCACGGC TCTCACGGGG
ACCCAGATGC TGCTGCCGAT GAACACCGGG GCGGAGGCGG TCGAGACCGC GATCAAGGTG
TCCCGCAAGT GGGGGTACGA CGTGCGCGGG GTGGCCCCAG AACGCGCGAC GATCGTGGTC
GCCGCCGGCG CGTTCCACGG GCGGACGACG ACGATCGTCT CGTTCTCGAC GGATCCGGAC
GCCCGCGACG GGTTCGGCCC GTACACACCG GGGTTCCGCG TCGTCCCGTA CGGCGACGCC
GACGCCGTCG CCGCCGCGAT CGACGAGCAC ACCGTGGCGG TCCTGCTCGA GCCGATCCAG
GGCGAGTCCG GCGTCGTCGT CCCGCCCGCC GACTACCTCC CCCGCGTCCG CGACGTCACG
GCGGCGGCCG GAGTCCTGCT CGTGCTCGAC GAGATCCAGT CGGGGCTCGG GCGGACCGGC
ACCACGCTGG CCGCCGACCG CGTCGGCGTC CGCGCGGACC TGGTGACGCT CGGGAAGGCG
CTCGGCGGCG GGGTGCTGCC CGTGTCGGCG GTCGTGGGAC GCGCGGACGT CCTCGGCGTG
CTCACGCCGG GCACCCACGG CTCGACGTTC GGGGGGAACC CGCTGGCCTG CGCCGTCGGG
ATCGCCGTGT GCCGGCTCCT GGAGCCGGGC GACCTGCAGG CGCGGGCCGC TGAGCTCGGC
GCAGTGATGG CGGCCCGGCT CGAGGAGATG CAGCGCGCCG GGCTGCTCGC CGCGGTGCGG
ACCGCCGGGC TGTGGGCCGG GATCGACGTG CCGGCGGACG CCGGGATCAC CGGTCGCGGC
CTGTGCGAGC GCCTGCTCGC CCGGGGCGTG CTCGCGAAGG ACACGCACGG GGCGACGATC
CGGCTCGCAC CGCCCCTGGT CGTCTCCGAG GCGGACCTGC ACACCGGCCT GGACGCCCTG
GAGGACGCGC TGCGCGCTTG A
|
|---|
| Protein sequence | MTADVRLATG STAPGREVLA HNYAPLPVTL HSGDGAWVRD AQGRAYLDFL AGYSALNFGH
GHPALLAAAH DQLDRLTLTS RAFDHDLLVP FADAVTALTG TQMLLPMNTG AEAVETAIKV
SRKWGYDVRG VAPERATIVV AAGAFHGRTT TIVSFSTDPD ARDGFGPYTP GFRVVPYGDA
DAVAAAIDEH TVAVLLEPIQ GESGVVVPPA DYLPRVRDVT AAAGVLLVLD EIQSGLGRTG
TTLAADRVGV RADLVTLGKA LGGGVLPVSA VVGRADVLGV LTPGTHGSTF GGNPLACAVG
IAVCRLLEPG DLQARAAELG AVMAARLEEM QRAGLLAAVR TAGLWAGIDV PADAGITGRG
LCERLLARGV LAKDTHGATI RLAPPLVVSE ADLHTGLDAL EDALRA
|
|---|
| |