Gene Bcav_0882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0882 
Symbol 
ID7860246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp981372 
End bp982082 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content72% 
IMG OID643864963 
Productiron (metal) dependent repressor, DtxR family 
Protein accessionYP_002880905 
Protein GI229819379 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.201089 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGACC TCATCGACAC CACTGAGATG TACCTGAAGA CCGTGTACGA GCTCCTCGAG 
GAGGGCATCG TCCCGCTCCG CGCCCGGATC GCGGAGCGGC TCGGGCACTC GGGGCCCACG
GTCTCGCAGA CGGTCGCCCG GATGGAGCGG GACGGCCTCG TCGTCGTGAG CGGCGACCGC
CACCTCGAGC TCACCGACGA GGGCATGGCG AAGGCCACTC ACGTGATGCG CAAGCACCGC
CTCGCGGAGC GGCTGCTCAC CGACGTCATC GGCCTCGACT GGGCGCACGT CCACGAGGAG
GCGTGCCGGT GGGAGCACGT GATGAGCCAG CAGGTCGAGG AGCGGCTGGT CGGGCTGCTC
GACCACCCGC ACTTCGACCC GTACGGCAAC CCGATCCCCG GGCTCGACGA GCTGGGCGAG
CGCGGGTCGG AGTCGTTCCT CGCCGGGGTG CGTCCGGTGC TGGACGTCGC CGGCGACGAC
GCGCGCGAGG TGGTCGTCAA GCGGATCGGG GAGCCGTTGC AGGTGGACGT CGAGCTGCTC
GCCCGGTTCG ACGAGAGCGG CGTGCGCCCC GGCGCGCGGG TCACCGTGCA GCGGGACACG
TCCACGTTGA CGGTGCGGGC CGCCGGGTCC GACCTGGTGC TGGACCTGCC GGTCGAGCTC
GCCAAGCACG TGTTCGTGGC CGACGGCGCG GCGGCAGCCA GCACTCCGTG A
 
Protein sequence
MSDLIDTTEM YLKTVYELLE EGIVPLRARI AERLGHSGPT VSQTVARMER DGLVVVSGDR 
HLELTDEGMA KATHVMRKHR LAERLLTDVI GLDWAHVHEE ACRWEHVMSQ QVEERLVGLL
DHPHFDPYGN PIPGLDELGE RGSESFLAGV RPVLDVAGDD AREVVVKRIG EPLQVDVELL
ARFDESGVRP GARVTVQRDT STLTVRAAGS DLVLDLPVEL AKHVFVADGA AAASTP