Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0880 |
Symbol | |
ID | 7860244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 979059 |
End bp | 980195 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643864961 |
Product | phosphoserine aminotransferase |
Protein accession | YP_002880903 |
Protein GI | 229819377 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG1932] Phosphoserine aminotransferase |
TIGRFAM ID | [TIGR01366] phosphoserine aminotransferase, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00411134 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.22946 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCCGG GCATGCCCAC GTCGGACGCG ATCACGATCC CGCCGCACCT GCTCCCCGCG GACGGTCGGT TCGGCTCCGG TCCCAGCAAG GTCCGTCCCG CCCAGGTCGA CATGCTGGCG GCGCTCGGCC GCACGGTCCT CGGGACGTCC CACCGCCAGG CGCCCGTGCG CCGGCTGGTG GCCCGCGCCA AGGAGGGGCT GCTCGACCTG CTCGGCGCCC CGGCGGGCTA CGAGGTCGTG CTGGGCAACG GCGGCAGCAC CACGTTCTGG GACGTCGCCA CGTGCTCGCT CGTCGCTCGC CGTGCCCAGC ACGCCACCTT CGGCGAGTTC GGCGCGAAGT TCGCCGCCGC GACCCGCGCC GCCCCGTTCC TGGACGAGCC GGACGTGCGC GAGGTGCCGC CCGGCCGGCT CGCGCTCCCG GAGGCGACCG ACGGCGTCGA CACGTACGCC TGGCCCCAGA ACGAGACCTC GACCGGCGTC GTCGCACCCG TGCGGCGCGT GGGCGGGGAC GCAGCCCTCG TCGTCGTCGA CGCCACCTCC GCGGCCGGTG CGGTGCCCGT GGACCTCGCC GAGACCGACG TCTACTACCT TGCCCCGCAG AAGGTCCTCG CCTCCGACGG CGGCCTGTGG TTCGCCGTCG TCTCGCCGTC CGCGGTGGAG CGCGCCGCGA CGGTCGCGGC GTCCGACCGG TGGATCCCGG AGTCGCTCTC GTTCACGACG GCGCTGGCGA ACTCGCGCCT GGACCAGACG CTCAACACGC CGGCGATCGC GACGCTCGTC CTGCTCGTCG AACAGCTCGA CTGGTTGCGC GAGGCGGGCG GACTGGAGTG GGCGGCGGCG CGCAGCGCGG CCAGCGCGCG GGTGCTGTAC TCGTGGGCCC AGAGCCGGGA GTGGGCGACG CCGTTCGTCG CCGAGGAGGC GCTGCGCTCC CCCGTGGTCG GCACGATCGA CCTGGACGAC GCCGTCGACG CCCGCGCCGT CATCGCTGCC TTGCGCGACA ACGGGATCGT CGACGTCGAC CCGTACCGCA AGCTCGGCCG CAACCAGCTG CGCGTGGGGA TGTACCCCGC CGTCGACCCG GCCGACGTCG AGGCGCTCAC GGCCTGCGTG GACCACGTGG TCGAGCGCCT CGCCTGA
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Protein sequence | MIPGMPTSDA ITIPPHLLPA DGRFGSGPSK VRPAQVDMLA ALGRTVLGTS HRQAPVRRLV ARAKEGLLDL LGAPAGYEVV LGNGGSTTFW DVATCSLVAR RAQHATFGEF GAKFAAATRA APFLDEPDVR EVPPGRLALP EATDGVDTYA WPQNETSTGV VAPVRRVGGD AALVVVDATS AAGAVPVDLA ETDVYYLAPQ KVLASDGGLW FAVVSPSAVE RAATVAASDR WIPESLSFTT ALANSRLDQT LNTPAIATLV LLVEQLDWLR EAGGLEWAAA RSAASARVLY SWAQSREWAT PFVAEEALRS PVVGTIDLDD AVDARAVIAA LRDNGIVDVD PYRKLGRNQL RVGMYPAVDP ADVEALTACV DHVVERLA
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