Gene Bcav_0877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0877 
Symbol 
ID7860241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp977091 
End bp978191 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content74% 
IMG OID643864958 
Productrhs protein 
Protein accessionYP_002880900 
Protein GI229819374 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000054215 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.085728 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGGA ACTCGCTCGT CGTCAGCCCC ACCGAGTCGT CCCCGCTCGC CGGCACCCTG 
CTCGTCGAGA GCGTCTCCGA CCTGTCGACG TCGCTCGCCA ACGGCGACTG GCTCGCCGCC
GGGATGGCGG GTGCGTCGAC CGCCCTGGAC ACCGTCGCGA CGGCGATGGA CCCGCTCGGC
TCGCTGCTGG GCGCCGGGCT CGGGTGGCTG ATGGAGCACC TCGAGCCGCT GAAGGGCTGG
CTCAACGACC TCACCGGCGA CCCCGGCGCC GTCGGCGGCT TCGCCGGGAC GTGGGAGAAC
ATCGCCACGC GGATGTCCGA GAGCGCGGAG TCGCTGCGCA CCGCCGTCTC GAGCGACCTC
GAGTCGCTCG AGGGTGCGGC CGTCACGTCG TACGCGAGCT TCTCCGACGA CGTCGCGGCG
ATGCTGGCGG CGCTCGGCGG CTCGTCCGGC GCCGTCGCCG GCGCGCTGCG CACGTGCGCC
ACGATCGTGC AGGTCGTCCA CGACCTCGTG CGGGACGCGC TCGCGCAGCT CGTCGGCTCG
GCGATCTCCT GGGCGGCCCA GATCACGTTC ACCCTCGGGC TCGGCACCCC GTGGGTGATC
AGCCAGGTCA GCACGCGTGT GTCGTCGCTC GCGGCTCGGG TCGGCAGCAA GGTGACGGCG
CTCGTCACCT CGGTGCGCAA CCTGCGCGGC GTCATCGACT CGCTCGTCGC GCTGCTGCGC
CGCACCCGCG GCACGCTCGA CGACGTCACG GCCCGTCCGG ACGCCGTCGC CCCGACCCCG
CGCACCGACC TGCCGTACTC GAACCCGCGG CGTCGGCCGT CCTACCGCCA GGGTGTCCCC
GAGGAGGTCT GGGACAACGC CCGCGGCCCG GACGGCGTGG TCCGCGACCC CAACACCGGC
GACGTCATCG ACTGGACCCC CGGCACGCCC CGCCGGGACG TGTGGGACAT GGGGCACGTG
CCCGGCGAGC GGTACCACGA CGTCTGGGAG CGGTACATGC GCGGCGAGAT GACCCCGGCG
GAGTTCCGCG ACTGGTTCAA CGACCCCGCG AACTACCGGC CGGAGCTCCC GGGCAACAAC
CGGGGCCATC GCTACGAGTA G
 
Protein sequence
MTGNSLVVSP TESSPLAGTL LVESVSDLST SLANGDWLAA GMAGASTALD TVATAMDPLG 
SLLGAGLGWL MEHLEPLKGW LNDLTGDPGA VGGFAGTWEN IATRMSESAE SLRTAVSSDL
ESLEGAAVTS YASFSDDVAA MLAALGGSSG AVAGALRTCA TIVQVVHDLV RDALAQLVGS
AISWAAQITF TLGLGTPWVI SQVSTRVSSL AARVGSKVTA LVTSVRNLRG VIDSLVALLR
RTRGTLDDVT ARPDAVAPTP RTDLPYSNPR RRPSYRQGVP EEVWDNARGP DGVVRDPNTG
DVIDWTPGTP RRDVWDMGHV PGERYHDVWE RYMRGEMTPA EFRDWFNDPA NYRPELPGNN
RGHRYE