Gene Bcav_0848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0848 
Symbol 
ID7860212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp947253 
End bp947636 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content73% 
IMG OID643864929 
Productcold-shock DNA-binding domain protein 
Protein accessionYP_002880871 
Protein GI229819345 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.433224 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00674689 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGCCCACCG GCAAGGTCAA GTTCTTCGAC GCCGACCGCG GCTTCGGCTT CATCGCGGCC 
GACGACGGCG GCGAGGTCTT CCTGCACGCC TCCGCCCTCC CGGCGGGATC GCCGTCGCCG
AAGCCCGGCA CGCGGGTGGA CTTCGGCATC GCCGACGGTC GCCGCGGGCC GCAGGCGTTG
TCCGTGACGA TCCTCGACCC GGCGCCGTCC GTGGCGCGGG GGCAGCGACG CCCGGCCGAA
GACATGGTCC CGGTCGTCGA GGACCTCATC AAGCTGCTCG ACGGCGCCTC CAACAGCCTG
CGCCGAGGCC GCTACCCGGA GCGCGCCCAG GCGACGAAGC TCGCCCAGGT GATGCGCGTC
GTCGCCGACG ACTTCGACGC CTGA
 
Protein sequence
MPTGKVKFFD ADRGFGFIAA DDGGEVFLHA SALPAGSPSP KPGTRVDFGI ADGRRGPQAL 
SVTILDPAPS VARGQRRPAE DMVPVVEDLI KLLDGASNSL RRGRYPERAQ ATKLAQVMRV
VADDFDA