Gene Bcav_0826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0826 
Symbol 
ID7859158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp922627 
End bp923910 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content77% 
IMG OID643864907 
ProductGlycosyl hydrolase family 32 domain protein 
Protein accessionYP_002880849 
Protein GI229819323 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1621] Beta-fructosidases (levanase/invertase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.146674 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCTCA CCACCGCCCT GGACCCCTTC CCGCACCTGC ACGTCCGCCC GGAGCGCGGT 
TGGGTCAACG ACCCGAACGG CATCGGGTTC TGGGACGGCC TCTGGCACGT CTTCTACCAG
CACAACCCGG ACGTCCCGCG TCACGAGGCG ATCTGCTGGG GCCACGCGAC CTCCGCCGAC
CTGCTCACGT GGCGGGACGA GGGCGTGGCG CTGCGGCCCC GGCCCGGCGC GATCGACGCG
GCGGGCGTGT GGAGCGGCGT GGCGACGACG GACGACGACG GCGCCCCGCT GCTCGCGTAC
ACGGCGGTAC CGGACGTGGC GGGGAACGCC GGCATCGCGC TCGCGCGGCC CGACGGCGAC
GGCGGGTGGG TGGCCGACGA GCGGATGGTC GCCCCGCGGC CCGCGGACCC GGGCATCCGC
GACGTCCGCG ACCCGTTCCT GTTCCGCGTC GACGGACGCC GCTACGCCGT CCAGGGCGCC
GGCCGCACCG ACGGCACGCC GCTCGTGCTC GTGTACGACG CGTCCGACCT CGACGACTGG
CGCCTGCTCG GCCCGCTGCT CGACGGTGCC GACCCCGTGG TCCGCGCGCT GGCGCCTGCC
GAGATCTGGG AGTGCCCGTC GCTGGTGCGC CTCGGCGAGG ACGGCGCGTG GGCGCTCGTC
GTCTCGCGCT GGCACTCGGG CGGCGACCAC GACCTGCGCG GCGTCGTGGC GTTCGTCGGC
GACCTGGTGC TCGACTCGGG CCGCCCGCGG TTCGTGCCGC GCGCCGGTGC CGACCTCGAC
CTCGGGCCCG ACTTCTACGC CCCGCAGGCC TACGACGCCG GCGACCGCGT CCTCCTGTGG
GGCTGGACCT GGGAGGGCCG CGGCGAGGGA GCCCCCACCG AGGCCGACAT CGACGCCGCC
GGCTGGGCCG GCTCACTGAC GTTCCCGCGC GAGCTGGGCC TCGACGGCGA CCGAGTCACG
TCCGCCCCCG CCCGGGAACT GACCGGCCTG CGGCGATCCG AGGTGGCGAC GGCCGTGCCC
GAGGTGCGCC TGACCGTGCC GGCGTGGGAG GCCACCGCGA GCGGCGGCGT CGTCGTCTCG
CTCGACGGAC CCGACGGCGA GCGCGAGATC TGGCGTGGGG GCGACGACGG CGGCACGCGG
GTGCTCGTGG ACGGTTCCGT GGTCGAGGTG TTCGCCGGCG GCGACGCGCA CACGGTCCGC
GCCTACCCGC GAGCGGGCGA GTCCTGGGTG GTGCGCGCCG CCGGCGGACT CACCGCGTGG
GAGCTGGGCC GACCGACTCC CTGA
 
Protein sequence
MTLTTALDPF PHLHVRPERG WVNDPNGIGF WDGLWHVFYQ HNPDVPRHEA ICWGHATSAD 
LLTWRDEGVA LRPRPGAIDA AGVWSGVATT DDDGAPLLAY TAVPDVAGNA GIALARPDGD
GGWVADERMV APRPADPGIR DVRDPFLFRV DGRRYAVQGA GRTDGTPLVL VYDASDLDDW
RLLGPLLDGA DPVVRALAPA EIWECPSLVR LGEDGAWALV VSRWHSGGDH DLRGVVAFVG
DLVLDSGRPR FVPRAGADLD LGPDFYAPQA YDAGDRVLLW GWTWEGRGEG APTEADIDAA
GWAGSLTFPR ELGLDGDRVT SAPARELTGL RRSEVATAVP EVRLTVPAWE ATASGGVVVS
LDGPDGEREI WRGGDDGGTR VLVDGSVVEV FAGGDAHTVR AYPRAGESWV VRAAGGLTAW
ELGRPTP