Gene Bcav_0822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0822 
Symbol 
ID7859154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp918623 
End bp920074 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content75% 
IMG OID643864903 
Productbeta-lactamase 
Protein accessionYP_002880845 
Protein GI229819319 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.242788 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACGA CCCACCCCAC GAGCCCGACC CTCGACCCCG CCGCCCCGCT GCCGACCTCC 
ACGCCGGAAC GCGAGGGCAT CCCGTCCGCC GCGATCGGCG CACTCCTCGA CGCTCTCGAG
GCGGCCGGCG TCGAGATGCA CAGCCTCGTG CTCGCCCGGC ACGGGAACGT CGTCGCCTCC
GGCTGGTGGG CGCCGTACCG CAGCGACGAC ATCACCCTCA TGTACTCGCT GAGCAAGAGC
TTCACGTCGA CGGCCGTCGG TGTGGCCGTC GCCGAGGGGC GGCTGGGCCT GGACGACGCC
GTCACCTCCT TCTTCCCGCC GGCCGCCTCG GCCGGTGCGG GGCCGCGCAC GCGCGCCATG
CGGGTGCGCC ACCTCCTCGC GATGTCGACG GGTCATGCCC AGGACACGAC GGCGCGCCTC
GACACGGCGG ATCCCGTCGG GTCGTTCCTC GCGATCGAGC CGGACGCGGA TCCGGGCACG
CTGTTCTGCT ACAACAGCGG CGCGACGCTC ATGCTCTCCG CGATCCTCAC GGAGCTCACG
GGGGAGCGCC TCCTCGACTA CGCCCGCGCG CGCGTGCTCG ACCCGCTCGG GATCGGCTCG
GCGTACTGGT CCCGGTTCGG GCGCTACGAC ATGGGGCTGT CCGGTCTGCA CGTGACGACC
GACGACGTCG CCCGCCTGGG GCTGATGTAC CTCGGCGGCG GGGAGCTCCG CGGCCGGCGC
GTCGTCCCGG CCCAGTGGGT GGAGACCGCC AGCGCCATGC ACACCGACAA CTCCGGCCGG
GGCGCCGGCC CCGACTGGGA GCAGGGCTAC GGGTTTCAGC TGTGGCGCGC CCGCCACGGC
TACCGCGGGG ACGGCGCGTT CGGTCAGTTC TGCGTCGTGC TGCCGGAGCA CGACGTGGTG
CTCGCCTCGA CGGCCGCGAC CGAGAACATG CAGGGCGTGC TCGACGCCGT CTGGCAGACG
CTGCTCCCGG CGTTCAGCGC CGAGGCGCTG CCGGACGACG ACGTCGCGCA CGCCGCGCTC
CGCGACCGGC TGGCGAGCCT CGCGCTGCCC GCGGTCGCGT CGGTCGTCCC AGGCTCGGAC
GGCGCCTGGG ACCTCGCGCT GACCGGTCCG GCGGCGGACT GGGTCGACGG CGTCCGTCTC
GAGGCGGCCG CGGGCGCGGC ACGGCTGGTG CTCGCTGAGG ACGGCGTGCC GCTGGACCTC
CAGCTCGGCG ACGGGACGTG GGTGCGCACC GATGTGCCGA TCCGCGACGA CCGCGTGCTG
CGCGTCGAGG CGACCGGCGG CTGGTGCGCA CCGGGCGTGC TCGAGGCCGA CGTCCTGGCC
GTCAACACCC CGCACCATCT GCGTCTGCGC TGCGACGTGG CGTCCGGGAC GGCACATGTC
GCGTGGCACA CCGTGCCACT GCGCGCGGCG TCGCTGGTGC GCCTGGCGAT CCCGCGAGCG
GTGCTCGACT GA
 
Protein sequence
MTTTHPTSPT LDPAAPLPTS TPEREGIPSA AIGALLDALE AAGVEMHSLV LARHGNVVAS 
GWWAPYRSDD ITLMYSLSKS FTSTAVGVAV AEGRLGLDDA VTSFFPPAAS AGAGPRTRAM
RVRHLLAMST GHAQDTTARL DTADPVGSFL AIEPDADPGT LFCYNSGATL MLSAILTELT
GERLLDYARA RVLDPLGIGS AYWSRFGRYD MGLSGLHVTT DDVARLGLMY LGGGELRGRR
VVPAQWVETA SAMHTDNSGR GAGPDWEQGY GFQLWRARHG YRGDGAFGQF CVVLPEHDVV
LASTAATENM QGVLDAVWQT LLPAFSAEAL PDDDVAHAAL RDRLASLALP AVASVVPGSD
GAWDLALTGP AADWVDGVRL EAAAGAARLV LAEDGVPLDL QLGDGTWVRT DVPIRDDRVL
RVEATGGWCA PGVLEADVLA VNTPHHLRLR CDVASGTAHV AWHTVPLRAA SLVRLAIPRA
VLD