Gene Bcav_0790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0790 
Symbol 
ID7859121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp880515 
End bp881918 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content76% 
IMG OID643864870 
Productoxidoreductase domain protein 
Protein accessionYP_002880813 
Protein GI229819287 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0510551 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACGC GACCCGCCCC GTCCGAGACG ACCACCGAGA CCACCCGCCG CACGTACGCC 
GTCGTCGGCA CCGGCTCGCG CTCGCGCATG TACGTCGATG CCGCGACGAC GACGCACGCC
GACGTGGCCG AGCTCGTCGC CCTGGCGGAC CCCAACGCGG TGCGCGTCGG CGTCTCCCGC
GACCGCGTCG CCTCGACCGG CGCTGAGCCC GCGATCTTCG CCGGGCCGGA CGCCACCAGG
GACGTCCTGG CCACCGCACC GGACGTCGTC GTCGTCACGA GCCCCGACCA CACGCACGCG
GACGTCGCCG TCGCGGCGCT CGAGGCGGGT GCCGACGTCG TCGTCGAGAA GCCGCTCACG
ACGTCGGCCG ACGGCGTCCG GCGCCTCGCC CGGGCGCTCG AGGCGTCCGG GCGGTCGCTC
GTCATGACGT TCAACTACCG GTACTCGCCG CGGAACTCGC GGGTGAAGGA GCTGCTCGCC
ACGGGAGCGA TCGGCGACGT CACGGCCGTC CACTTCGAGT GGTGCCTCGA CACCGCGCAC
GGCGCCGACT ACTTCCGCCG CTGGCACCGC GACAAGGCCG GCTCGGGCGG CCTGCAGATC
CACAAGTCGA GCCACCACTT CGACCTCGTG AACTGGTGGC TCGACGACGT CGCCGAGGTC
GTGTTCGCGC GCGGCGGCCT GCGCCGCTAC GGCGACGGCA ACGCGCCGGC GGCCGGCCGC
CCGCGACTGG GCCGCGACGT CCTGGGCGCC GACCCGGGCG ACCCCTGGGC GCTCGACCTC
GCGCGCGACG AGACGCTGCG CACGCTCTAC CTGGAGGCCG AGGGCTCCGA CGGCTACCAG
CGCGACGTCG ACGTCTTCGC CCCCGGGGTG ACGATCGAGG ACACGCTGTC GGTGCTCGTC
GGCTACCGCG GCGGCGCGAA CCTCACGTAC GCGCTCAACG CGTACTCCCC GTGGGAGGGC
TACCGCGTGG CGTTCACGGG GACGCTGGGT CGCCTCGAGC TGGACGTCGT CGAGCGGTCC
TGGGTCCCGG CCCCGGGCGA GGGCCACGGC CGGGTCGTCG ACCCGAGCGC CGCGGCCGAC
GAGACGGCCG CCGCATCCGT CGACGTGCGC CCGCCGGGCA CGCGCCTGAC GCTGCAGCGA
CACTGGGAGC GGGCCGAGGA GGTCGAGATC CCGATGGGAA GCGGAGCGCA CGGCGGCGGC
GACGCCGTGC TGCTCGACGA CGTGTTCCGC GGCGTCGGGT CGCGCCCCGA TCCCCTGGGC
CGGTCGGCGG GGCTGCGGGA CGGCGTTGCC GCCGTCGCCG TCGGGCTGGC CGTGAACGCG
TCGCTCGACG CCGGCACGGC CGTCCGGGTC GCCGACCTGG ACCTCGCCGG CGTGCTGGAC
GACGGCGCCG AGGTCGCGTC GTGA
 
Protein sequence
MTTRPAPSET TTETTRRTYA VVGTGSRSRM YVDAATTTHA DVAELVALAD PNAVRVGVSR 
DRVASTGAEP AIFAGPDATR DVLATAPDVV VVTSPDHTHA DVAVAALEAG ADVVVEKPLT
TSADGVRRLA RALEASGRSL VMTFNYRYSP RNSRVKELLA TGAIGDVTAV HFEWCLDTAH
GADYFRRWHR DKAGSGGLQI HKSSHHFDLV NWWLDDVAEV VFARGGLRRY GDGNAPAAGR
PRLGRDVLGA DPGDPWALDL ARDETLRTLY LEAEGSDGYQ RDVDVFAPGV TIEDTLSVLV
GYRGGANLTY ALNAYSPWEG YRVAFTGTLG RLELDVVERS WVPAPGEGHG RVVDPSAAAD
ETAAASVDVR PPGTRLTLQR HWERAEEVEI PMGSGAHGGG DAVLLDDVFR GVGSRPDPLG
RSAGLRDGVA AVAVGLAVNA SLDAGTAVRV ADLDLAGVLD DGAEVAS