Gene Bcav_0773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0773 
Symbol 
ID7859104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp862614 
End bp863096 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content67% 
IMG OID643864853 
Producttranscriptional regulator, CarD family 
Protein accessionYP_002880796 
Protein GI229819270 
COG category[K] Transcription 
COG ID[COG1329] Transcriptional regulators, similar to M. xanthus CarD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.164526 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.216229 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTCA ATGTCGGCGA GACGGTCGTC TACCCGCACC ACGGTGCAGC CCTCATCGAA 
GAGATCTCCA CCAGGGTCAT CCGAGGAGAA GAAAAGCTCT ACCTGCGGCT CAGGGTCGCG
CAGGGTGATC TGACGATCGA GGTGCCCGCC GAGAACGTCG ATCTCGTCGG CGTGCGCGAC
GTCGTCGGGA AGGAAGGCCT CGACAAGGTG TTCGAGGTGC TTCGGGCCCC GTACACCGAG
GAGCCCACCA ACTGGTCGCG GCGGTACAAG GCGAACGTCG AGAAGATCGC GTCAGGTGAC
GTGATCAAGG TCGCGGAGGT CGTGCGCGAC CTGTCGCGGC GGGACCAGGA CCGCGGGCTG
TCCGCCGGGG AGAAGCGCAT GCTCGCCCGG GCGCGCCAGA TCCTCGTCTC GGAGCTCGCG
CTCGCGGAGA AGACCGAGGA GGACCGGGCC GAGGCGATCC TCGACGAGGT CCTCGCCTCC
TGA
 
Protein sequence
MTFNVGETVV YPHHGAALIE EISTRVIRGE EKLYLRLRVA QGDLTIEVPA ENVDLVGVRD 
VVGKEGLDKV FEVLRAPYTE EPTNWSRRYK ANVEKIASGD VIKVAEVVRD LSRRDQDRGL
SAGEKRMLAR ARQILVSELA LAEKTEEDRA EAILDEVLAS