Gene Bcav_0723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0723 
Symbol 
ID7861821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp797391 
End bp798488 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content76% 
IMG OID643864803 
Productputative secreted protein 
Protein accessionYP_002880746 
Protein GI229819220 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2706] 3-carboxymuconate cyclase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.780162 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCAG GCGCGACGCT CCGGCACCCA CTCTGGCTCG GCACCTACCC GCCCGGAGGT 
GCCGGGGCGC CGGCCGGATC CGGTGAGGGC CTCTGGTTCC TCGGCGCCGC GGGCCCGGTG
CAGGTGGCGC CGTCGCCGTC GCCGTCGTTC CTCGCCGCGC ACCCGAGGGC CCCGCGCCTG
TACGCCGTCG CCGAACAGGT CGACGGCGCC GTCGCGACGT TCGCGGTGAC CGAGGACGGC
GCCGCGACCC CCCTCGCGAC AGTGCGCAGC GGGGGGACGG CGCCCTGCCA CCTCGCCGTG
CACCCGAGCG GGCGGTGGCT GTACGTCGCG AACTACGGCG ACGGCGTCGC CAGCGCGATC
GGTCTCGACG ACGCCGGGAA CCCGACGAGC GACGTCGTCC TCCTGCGGCA CGACGGGAGC
GGCCCGAACG CCGATCGTCA GGCCGGACCT CACGCGCACT CGTGCACGCT GTCGCCCGGA
GGCACGCACC TGCTCGTCGC CGACCTCGGG ACCGACCAGC TCCGCGCCTA CCCGCTGGAC
GCCGAGGGCC GACCCGGCGC GCAACCGGTG CTGTCGGACC TGCCGCCCGG CACGGGACCC
CGGCACGTCG CCGTCGACGG CGAGACGCTG TACGTCACGC TCGAGCTCAG CGACGAGGTG
GCGGTGCTCG CGTGGGACGC CGCGACAGCG CGCGCGGACC TGCTCTCCCG CGTCCCGACC
ACCGCGCGGC GCCCGGGCTC GGGCGGACCG GCGAGCTTCC CGTCGCACCT GGAGCTCACG
GTGCGCGACG ACGGCACCGC GCTGCTCGAC GTGGGCGTGC GCGGCGCCGA CGTCATCAGC
ACGTTCGCCG TGCACCGCGA CGACGTCCCG TCGCTCGACC TGATCGGCGA GTGCCCGACG
GCGACCTGGC CGCGGCACTT CGTCGCCGTC CGGGAGGGAG CGGGTCGGGT CGTGGTCGCG
GGCGAGCGCG CCCACCAGGT GGTGGTGCAC GAGCGCGACA CGACGGGCGT GCTGCGGCCC
GCGACCGTGC GCCTGGACGT CCCGGCGCCG GCGTGCGTGG TTCCTCAGCG GGCGAGCAGC
GTGGTCGAGA ACGAGTAG
 
Protein sequence
MTSGATLRHP LWLGTYPPGG AGAPAGSGEG LWFLGAAGPV QVAPSPSPSF LAAHPRAPRL 
YAVAEQVDGA VATFAVTEDG AATPLATVRS GGTAPCHLAV HPSGRWLYVA NYGDGVASAI
GLDDAGNPTS DVVLLRHDGS GPNADRQAGP HAHSCTLSPG GTHLLVADLG TDQLRAYPLD
AEGRPGAQPV LSDLPPGTGP RHVAVDGETL YVTLELSDEV AVLAWDAATA RADLLSRVPT
TARRPGSGGP ASFPSHLELT VRDDGTALLD VGVRGADVIS TFAVHRDDVP SLDLIGECPT
ATWPRHFVAV REGAGRVVVA GERAHQVVVH ERDTTGVLRP ATVRLDVPAP ACVVPQRASS
VVENE