Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0714 |
Symbol | |
ID | 7861812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 788520 |
End bp | 789113 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 643864794 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_002880737 |
Protein GI | 229819211 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.113218 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCCTAGGG CGGGGCTCTC CCGCGACGCC GTCGTCGCGC TCGCGCTCCG CCTGGTCGAC GACGGCGGCC CGCGCGGGTT CGACGACCTC ACGCTCGCGC GTGTCGCCTC GGCGGCCGGC GTCGCGACGC CCAGCCTGTA CAAGCACGTC GCGTCGCTGG CGGACCTGCG CCGCGGGGTC GCCGTCGTCG CCGTGCGGGA CCTCACGCGC GCCATGGCCG AGGCGACCAT CGGCCGCTCC GGACCGGACG CCGTCGAGCA CCTGGCGCAC GCGTGGCGAT CGTTCGGCCA TGAGCACCCC GGCCGGTACG CGGCGACCCA GGTCGCACCC GACCCCGACG ACCCGGCCGA CGCCGGGCTG CGCGACGCCG CCCGGGAGGC GGTGAATCTC GCGGCAGCGG CACTGCGCGG GTTCGACCTC CCCCCGGACC GCATGATCGA CGCCATCCGC GTGCTTCGCG CCTCGGTGCA CGGCTTCGTG CTGCTCGAGC TGGGCGGCGG ACTGCGCCTC CCGCAGGATC TGGACCGCAG CTTCGACGCC CTCGTGCGGG TGCTCGTGGA CGGGATCGCC GCGCTCGCCC GGCCAGATTC GTGA
|
Protein sequence | MPRAGLSRDA VVALALRLVD DGGPRGFDDL TLARVASAAG VATPSLYKHV ASLADLRRGV AVVAVRDLTR AMAEATIGRS GPDAVEHLAH AWRSFGHEHP GRYAATQVAP DPDDPADAGL RDAAREAVNL AAAALRGFDL PPDRMIDAIR VLRASVHGFV LLELGGGLRL PQDLDRSFDA LVRVLVDGIA ALARPDS
|
| |