Gene Bcav_0697 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0697 
Symbol 
ID7861795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp773218 
End bp774612 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content77% 
IMG OID643864777 
ProductD-alanyl-D-alaninecarboxypeptidase/D-alanyl-D- al anine-endopeptidase 
Protein accessionYP_002880720 
Protein GI229819194 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) 
TIGRFAM ID[TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.417134 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACCC GGACCCGGCT CGTCGTGGCG GGTCTCGCCG TCGTCGTCGT GGGCGGCTAC 
GCCGTCGCTG ACGCGGCCGA CGTCGTCCCG GGCGTGCTGA CCACCGTCCC GCCGTGGCCG
GAGGCCGAAC CGTTCCCCAC GGTGACGCTC CCGGCGGAGC CGGTGCGCCC GCTCGTGCTG
CCGGACCTGG ACCCCGACGC GCCGATACCG GACCCGGCAG CGCTCGAGCC GGGCGTCGCG
GCGCTCCGCG GCGACGACGC CGTCGGGTCA CCTCCGGGAG TCGTCGTGGC CGACGTCGCC
ACGGGTGAGG TGCTGGTGAG CGCCGACGCG GAGACGGGCC GCGCCCCGGC GTCGACCCTC
AAGCTGCTGA CGGCGACGGC GGCCGTGAGC GCGCTCGACC TGTCCTCGCG CATCCCGACG
ACGCTCGTGC AGGACGGCGC TGACCACCTG GTGCTCGTGG GGCACGGCGA CATGGCGCTC
GCCGCCGGCG CCGGCGACCC GGACGCCACG ATCGGCCGGG CCGGCCTCGC GGACCTCGCC
GCGGAGGCGG CGAGCGTGCT GCAGGCAGCG GGCACGACGT CCGTGTCGCT GGCGGTCGAC
GACTCCCTGT TCACCGGACC GGAGTACGCG CCGGGCTGGG AGCCCGTGGA CTTCACGCAG
GGGTGGGTGG CGCCCGTCTC GGCCCTCGCC GTCGAGGTCG GGCACATCGA CGGGCGCCTG
CAGCGGGACA CGGACCCGGC GATGGGTGCG GCGAACGCGT TCGCCGCCGC GCTCGAGGAC
GCCGGCGTCG AGGTCCGTGG CGCGCCGGTG CGGGGCCGCG CCGGCGACGG GGTCCAGGAG
GTCGCCCGCG TGGAGTCGGC GACGATCCGC GAGCTCGTGG AGCACACCCT GCAGCTCTCG
GACAACACGC TCAGCGAGGT GCTCGGACGT CTCGTGGCGC TGGAGCACGG CCAGGAGGCG
AGCTTCGAGG GTGCGACCCG CGCCATCATC GCCGAGCTCG CGGCCACCGG CCTCGACACC
GGCGGCACGG TGCTCGTGGA CTGCTCCGGG CTGTCGTCCC GGAGCCGCGT CGCCCCACGG
CTGCTCTCGG ACCTGGTGCT GGCGATCACG CGCCCGGACA CCCCGGGGCT GCTCGCGGCG
GCGTCGGCGA TGCCCATCGC CGGGCTCGAG GGCACGCTCG CGGACCGGTA CTCCAGCGAG
GCGGCGGGCC TGGTGCGGGC CAAGACCGGC ACGCTCGCCG TCGTCGTCTC CCTCGCGGGG
AACGTCGTGA CGGCGGACGG CCGCCAGCTC GCGTTCGTGG TGATGGCCGA CGGCGTCCCG
CGCGCCGGCA CGTTCGCGGC GCGGGTGGCG ATCGACGAGT GGGTGTCGTC GCTCGCGGCG
TGCGGCTGCA CGTAG
 
Protein sequence
MRTRTRLVVA GLAVVVVGGY AVADAADVVP GVLTTVPPWP EAEPFPTVTL PAEPVRPLVL 
PDLDPDAPIP DPAALEPGVA ALRGDDAVGS PPGVVVADVA TGEVLVSADA ETGRAPASTL
KLLTATAAVS ALDLSSRIPT TLVQDGADHL VLVGHGDMAL AAGAGDPDAT IGRAGLADLA
AEAASVLQAA GTTSVSLAVD DSLFTGPEYA PGWEPVDFTQ GWVAPVSALA VEVGHIDGRL
QRDTDPAMGA ANAFAAALED AGVEVRGAPV RGRAGDGVQE VARVESATIR ELVEHTLQLS
DNTLSEVLGR LVALEHGQEA SFEGATRAII AELAATGLDT GGTVLVDCSG LSSRSRVAPR
LLSDLVLAIT RPDTPGLLAA ASAMPIAGLE GTLADRYSSE AAGLVRAKTG TLAVVVSLAG
NVVTADGRQL AFVVMADGVP RAGTFAARVA IDEWVSSLAA CGCT