Gene Bcav_0681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0681 
Symbol 
ID7858483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp756416 
End bp756928 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content77% 
IMG OID643864761 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002880704 
Protein GI229819178 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGACC GCGCCGATGC GTTCTCGAGC CGCTGGTTCG AGGAGACCTT CCGCGCGCAC 
GCGAGCGCGA TCGTCCGGTA CTTCGCCCGC CGCGGCCCGC GGCAGGACGC CGACGATCTC
GCGGCCGAGG TGTTCGCGAT CGCGTGGCGC CGGCGCGACG ACGTCCCGCG CGGCGCCGAG
CTGCCGTGGC TGTACCGCAC CGCCGGCTAC GTGCTCGCCA ACCACCGCCG CAAGCACCGC
GACGTGCCCG TCGACGACCT GCCGGACCAC CCGAGCGGCG CACCCGGCGG CGGCGACCCC
GCGCTCGCCG TCGTCACCGA CGCCGAGCTG CGCGGCGCGC TGGCCTCGGT GTCGGAGCGC
GACCGGGCGA TCCTCCTGCT GCACGCGTGG GAGGGCCTGA GCGGCGCGGA GCTGGCGGAC
GTCCTCGGCA TCTCGCGCTC GGGGGCCGAC GCCGCGCTGT CGCGTGCCCG GAAACGGCTG
CGGGAGGCGT GGCCCGACCG GATGGCGGTG TGA
 
Protein sequence
MDDRADAFSS RWFEETFRAH ASAIVRYFAR RGPRQDADDL AAEVFAIAWR RRDDVPRGAE 
LPWLYRTAGY VLANHRRKHR DVPVDDLPDH PSGAPGGGDP ALAVVTDAEL RGALASVSER
DRAILLLHAW EGLSGAELAD VLGISRSGAD AALSRARKRL REAWPDRMAV