Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0681 |
Symbol | |
ID | 7858483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 756416 |
End bp | 756928 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 643864761 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002880704 |
Protein GI | 229819178 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACGACC GCGCCGATGC GTTCTCGAGC CGCTGGTTCG AGGAGACCTT CCGCGCGCAC GCGAGCGCGA TCGTCCGGTA CTTCGCCCGC CGCGGCCCGC GGCAGGACGC CGACGATCTC GCGGCCGAGG TGTTCGCGAT CGCGTGGCGC CGGCGCGACG ACGTCCCGCG CGGCGCCGAG CTGCCGTGGC TGTACCGCAC CGCCGGCTAC GTGCTCGCCA ACCACCGCCG CAAGCACCGC GACGTGCCCG TCGACGACCT GCCGGACCAC CCGAGCGGCG CACCCGGCGG CGGCGACCCC GCGCTCGCCG TCGTCACCGA CGCCGAGCTG CGCGGCGCGC TGGCCTCGGT GTCGGAGCGC GACCGGGCGA TCCTCCTGCT GCACGCGTGG GAGGGCCTGA GCGGCGCGGA GCTGGCGGAC GTCCTCGGCA TCTCGCGCTC GGGGGCCGAC GCCGCGCTGT CGCGTGCCCG GAAACGGCTG CGGGAGGCGT GGCCCGACCG GATGGCGGTG TGA
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Protein sequence | MDDRADAFSS RWFEETFRAH ASAIVRYFAR RGPRQDADDL AAEVFAIAWR RRDDVPRGAE LPWLYRTAGY VLANHRRKHR DVPVDDLPDH PSGAPGGGDP ALAVVTDAEL RGALASVSER DRAILLLHAW EGLSGAELAD VLGISRSGAD AALSRARKRL REAWPDRMAV
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