Gene Bcav_0678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0678 
Symbol 
ID7858480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp752383 
End bp754464 
Gene Length2082 bp 
Protein Length693 aa 
Translation table11 
GC content73% 
IMG OID643864758 
Productprotein of unknown function DUF839 
Protein accessionYP_002880701 
Protein GI229819175 
COG category[R] General function prediction only 
COG ID[COG3211] Predicted phosphatase 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0533162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGA CCATCCCGTC CACCGGGCGC CCGACCCCGC CCCGCCGGCC CTTGCCGCTG 
CTGGGGCACG GCGGCAACCG CTCGGCGCTC ACCTGCCGGT ACCGGTGCGG GGACGCGTGC
TTCCACGACG TCCCCAACAC GTCACGCGGG GAGACGTTCG GCGACGTCGT CGCCGCGGGG
ATCTCGCGTC GCAACCTGCT CAAGGTGGGT GCCGTCGTGG CGGCCGCCGG CGCGGTCGGC
GTCCTCGGCC AGCAGCCCGC TGCAGCGCAC GGGGGCCGGG GCAGCGCACG GGGCCTCGCG
TTCACCCCGG TGGCGCCGAA CACCGCCGAC GCGGTCACGA CGCCGCCCGG ATACGTCTCG
GAGGCCTTCC TGCGCTGGGG CGACCCGCTG TTCTCCGACG CCCCGGCGTT CGACCCGTCC
GCGCAGACGG CGGCCGCCCA GCAGCGCCAG TTCGGCTACA ACAACGACCA CCTCGACATG
TTCGACCTCG GCCGTGGCCA GTTCGCGATG GTGGTCAACC ACGAGTACAC GGACGAGCCG
ATGATGTTCC CCGCCTACGA CCCCGAGGCG CCGACGGCGG AGCAGGTCGA GATCGCGTGG
GCGGCGCACG GCCTGACGGT CGTCGTCGTC GAAGAGCGCC GCGGTCGCGG CCGCGGATCC
GGGGCGCTGA GCGTCGTCGT CGACCACCCG CTCAACCGGC GCCTGCACAC CACGAGCGAG
TTCGCCCTGA CAGGGCCGGT GGCGGGCCAC GAGCTCGTCC GGACGAGCGC CGACCCGGAC
GGCCGGACCG TGCTCGGCAC GCTCAACAAC TGCGCCGGCG GCATCACGCC GTGGAACACG
TGGCTGACCG CCGAGGAGAA CTTCAACCAG TACTTCGCCG GCGCCGACGC CGTGACCGAC
CCCGTGACGC GCGAGCGGCT GCGCCGGTAC GGCCTGCCGG GCGGCTCGAC CGACCGCAGG
TGGGAGCAGT TCGATCAGCG GTTCGACCTC GCCGCCGAGC CGAACGAGGT GAACCGGTTC
GGGTGGATCG TCGAGGTCGA CCCGATGGAC CCGAGCTCCA CGCCGAAGAA GCGCACGGCG
CTCGGTCGCT TCAAGCACGA GGCCGCGTAC CCGCGCGTCA CGCGGGACGG ACGCGTCGCC
CTGTACATGG GTGACGACGA ACGGTTCGAC TACTTCTACA AGTTCGTCTC GCGCGACCGC
GTCTCCCGCC GGGACTCCGA CCACAACGGC ACGCTGCTCG ACAACGGCAC CCTCTACGTC
GCCCGGTTCA CCGGTGACTC GCCGCCGGAG GAGATCCTCG GCGACGGTGC CCTGCCCGCC
GACGGCGAGT GGGACGGGTC GGGCGAGTGG ATCCCGCTCG TCACCAGCGA CGACCGCCGC
GGGCACGTGT CGCACGTGCC GGGGATGACG GCGGAGGAGG TGCTGCTCTT CACGCGGCAG
GCGGGCGACG CCGTCGGCGC CACGAAGATG GACCGGCCGG AGGACGTGGA GCCCAGCCCG
CGCACGGGGA CCGTGTACAT CGCGCTGACG AACAACACGG CCCGCGGTAC CGGCGCCAAC
CCCGGGCCGG ACGAGGCGAA CCCGCGCACG GCCAACAAGC ACGGGCACGT CGTCGAGCTC
GTCGAGCAGC GCCGGGACTC CGGCGCCGGG GCCTTCGCGT GGCGGATCTT CCTGCTGTGC
GGCGACCCGG CCGACCCGAG CACGTACTTC GCCGGCTACG ACAAGAGCCA GGTGTCGCCG
ATCTCCTGCC CGGACAACCT CACGTTCGAC GACCACGGGA ACCTCTGGAT CAGCACCGAC
GGGAACGCGC TCGGCACGAA CGACGGCCTG TTCGGCGTCG CGACCGATGG GCGGTACCGC
GGCCAGGTCA AGCAGTTCCT CACCGTGCCG CACGGCGCCG AGACGTGCGG GCCGCTCGTG
CAGGACAAGC GGGTGCTCGT GTGCGTGCAG CACCCGGGCG AGCTGGACGG CGCCTCGTTC
GAGAACCCGC TGTCGCACTG GCCCGACGGC GGGACCTCGA TCCCGCGGCC GTCGGTGGTC
GCGGCGTGGC ACGAGCGGGG ACGCCGCATC GGCGACGCCT GA
 
Protein sequence
MTETIPSTGR PTPPRRPLPL LGHGGNRSAL TCRYRCGDAC FHDVPNTSRG ETFGDVVAAG 
ISRRNLLKVG AVVAAAGAVG VLGQQPAAAH GGRGSARGLA FTPVAPNTAD AVTTPPGYVS
EAFLRWGDPL FSDAPAFDPS AQTAAAQQRQ FGYNNDHLDM FDLGRGQFAM VVNHEYTDEP
MMFPAYDPEA PTAEQVEIAW AAHGLTVVVV EERRGRGRGS GALSVVVDHP LNRRLHTTSE
FALTGPVAGH ELVRTSADPD GRTVLGTLNN CAGGITPWNT WLTAEENFNQ YFAGADAVTD
PVTRERLRRY GLPGGSTDRR WEQFDQRFDL AAEPNEVNRF GWIVEVDPMD PSSTPKKRTA
LGRFKHEAAY PRVTRDGRVA LYMGDDERFD YFYKFVSRDR VSRRDSDHNG TLLDNGTLYV
ARFTGDSPPE EILGDGALPA DGEWDGSGEW IPLVTSDDRR GHVSHVPGMT AEEVLLFTRQ
AGDAVGATKM DRPEDVEPSP RTGTVYIALT NNTARGTGAN PGPDEANPRT ANKHGHVVEL
VEQRRDSGAG AFAWRIFLLC GDPADPSTYF AGYDKSQVSP ISCPDNLTFD DHGNLWISTD
GNALGTNDGL FGVATDGRYR GQVKQFLTVP HGAETCGPLV QDKRVLVCVQ HPGELDGASF
ENPLSHWPDG GTSIPRPSVV AAWHERGRRI GDA