| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0657 |
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| Symbol | |
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| ID | 7858458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 732336 |
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| End bp | 735077 |
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| Gene Length | 2742 bp |
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| Protein Length | 913 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643864737 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_002880681 |
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| Protein GI | 229819155 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCAGCT CCGCCCGCAA GCTCGTGATC GTCGAGTCGC CGACCAAGGC GCGCACGATC
ACGCCGTTCC TCGGTGACGA CTACGACGTC GAGGCGAGCG TCGGGCACAT CCGGGACCTC
CCGCAGCCGT CCGAGCTGCC CGCGGAGATG AAGAAGGGCC CGTACCGGAA GTTCGCCGTC
GATGTCGAGA ACGGGTTCGA CCCGTACTAC GTGGTCGACG CTGACAAGAA GAAGAAGGTC
AGCGAGCTCC GCAAGAAGCT CAAGGCGGCC GACGAGCTCT ACCTCGCCAC GGATGAGGAC
CGCGAGGGCG AGGCCATCGC GTGGCACCTC CTCGAGGTGC TGGAGCCGAA GGTGCCCGTG
AAGCGGATGG TGTTCCACGA GATCACCCGC GAGGCGATCC AGCGGGCGCT GGAGGCGACG
CGCGACCTCG ACACGCGCCT CGTCGACGCC CAGGAGACCC GGCGCATCCT CGACCGGCTG
TATGGCTACG AGGTCTCGCC GGTGCTCTGG CGCAAGATCG GGCCGGGGCT CTCCGCCGGT
CGCGTGCAGT CCGTCGCCAC GAGGCTCGTG GTGGAGCGGG AGCGCGAGCG GATGGCGTTC
CGCAGCGCGA ACTACTGGGA CGTGCGCGGC GAGTTCAGCG GCGGGCGCGG CGAGACGGCG
GGCACGTCGT TCTCCGCGCG GCTGACGGCG CTCGACGGCG ACCGGGTCGC CACCGGCCGC
GACTTCGACG ACTCCGGCTC GCTCACGAGC AGGGCCGTCC ACCTCGACGA GGCGGCCGCG
ACGGCGCTCG TCTCCGCGCT CGACGGGGTC GACGTCGTCG TACGTTCCGT CGACACCAAG
CCGTACACCC GCCGCCCCGC CGCCCCGTTC ACGACGTCGA CCCTCCAGCA GGAGGCGAGC
CGCAAGCTGC GGATGAACTC GCGCGCGACG ATGCGCACGG CGCAGTCGTT GTACGAGAAC
GGCTACATCA CGTACATGCG GACCGACTCC GTGACGCTCT CGACCCAGGC GATCACCGCC
GCGCGCCGGC AGGCCGCGGA GCTGTACGGC GCGGAGTACG TGCCCGATGC GCCGCGCCTG
TACGCGAACA AGTCGAAGAA CGCCCAGGAG GCGCACGAGG CGATCCGGCC CGCCGGCGAC
TCGTTCCGCA CTCCCGCCCA GGTCGCGAGC CGGCTCTCCG GCGACGAGTT CCGGCTCTAC
GAGCTCATCT GGAAGCGCAC CGTCGCGTCG CAGATGGCTG ACGCGAAGGG GTCGACGGCG
TCCGTGAAGC TCGGTGCGAG CGCCGCCTAT CCCGACGGCG CGACCCGCGA CGCCGAGTTC
TCGGCCTCCG GCACCGTCAT CACGTTCCGC GGTTTCCTCG CGGCGTACGA GGAGGGCCGG
GACGCGGGCC GGTACGACGA GGACGGCGAC GGCGCGGGCC GCGGCTCCTC GTCGGGGTCG
TCGGCCGCGC GCGAGACCCG CCTGCCGGAT CTCGCCCAGG GCGACCAGGT CGCCGCGGAG
TCGCTCACCG CGGAGGGCCA CGACACCTCA CCCCCGCCCC GCTACACCGA GGCCAGCCTC
ACCGCCGCCC TCGAGGAGCG CGGCATCGGG CGTCCGTCCA CGTTCGCCGC CACGATCTCC
GTGATCGTGG ATCGCGGATA CGTCCTGCGC CGCGGACAGG CGCTCGTGCC GAGCTGGCTG
GCGTTCTCGG TGGTCCGGCT GCTGGAGGAC CACTTCGGGC GGCTCGTCGA CTACGACTTC
ACGGCCGCGA TGGAGTCCGA CCTCGACCGC ATCGCGCGCG GTGAGCAGGA CCGCGTGGCG
TGGCTGACCC GGTTCTACTT CGGCGACGAG GCGGCCGGCT CGGAGGGGCT GCAGCAGCTC
GTCTCCGAGC TGGGCGACAT CGACGCTCGC GGCATCAACT CGATCGACCT CGGTGGCGGC
GTCACCGTAC GGGTCGGCCG CTACGGTCCG TACCTCGAGG CGACCGGACC GGACGGCGAG
CCGCAGCGCG CGAGCGTGCC CGACGACGTC GCCCCGGACG AGCTGACGCT CGAGCGGGCC
CGCGAGCTGC TCGCCACCCA GGGCGAGGGC GACCGCGAGC TCGGCACCGA CCCGGCGACC
GGGCGCACCA TCGTGGCGCG CAGCGGGCGG TACGGGCCGT ACGTCACGGA GGTCATCCCC
GACGACGCCC CCGCCGCCTC GGACGACGCG AAGCCGGCGA AGCGCAAGCC GGCCAAGCCG
AAGCCGCGGA CGGCGTCGCT GCTGCAGTCG ATGCAGCTCG AGGCGGTGGA TCTCGAGCAG
GCGCTCAAGC TTCTCTCCCT GCCGCGCGTG GTCGGCGTCG ACCCGGAGTC GGGCGACGAG
ATCACCGCCC AGAACGGTCG GTACGGGCCG TACCTCAAGA AGGGCACCGA CTCGCGCTCG
CTCGAGACCG AGGACCAGAT CTTCGACATC ACGCTCGAGC AGGCTCTCGC GATCTACGCG
CAGCCCAAGC AGCGGCGCGG GCAGCGGGCG TCGTCGGCGC TGCGCGAGCT CGGGGACGAC
CCGGTGTCCG GCAAGCCGGT GAGCGTGAAG GACGGACGGT TCGGGCCGTA CGTCACGGAC
GGCACGACGA ACGCGACGCT CCGCAAGGAC GACGAGGTCG AGTCGATCAC GCCGGAGCGC
GCGTTCGAGC TCCTTGCGGA GAAGCGGGCC AAGGGGCCGG CGAAGAAGCG GACGACGGCG
CGGAGCTCGA GCCGGAAGGC GCCCGCCAAG TCGCGCTCCT GA
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| Protein sequence | MPSSARKLVI VESPTKARTI TPFLGDDYDV EASVGHIRDL PQPSELPAEM KKGPYRKFAV
DVENGFDPYY VVDADKKKKV SELRKKLKAA DELYLATDED REGEAIAWHL LEVLEPKVPV
KRMVFHEITR EAIQRALEAT RDLDTRLVDA QETRRILDRL YGYEVSPVLW RKIGPGLSAG
RVQSVATRLV VERERERMAF RSANYWDVRG EFSGGRGETA GTSFSARLTA LDGDRVATGR
DFDDSGSLTS RAVHLDEAAA TALVSALDGV DVVVRSVDTK PYTRRPAAPF TTSTLQQEAS
RKLRMNSRAT MRTAQSLYEN GYITYMRTDS VTLSTQAITA ARRQAAELYG AEYVPDAPRL
YANKSKNAQE AHEAIRPAGD SFRTPAQVAS RLSGDEFRLY ELIWKRTVAS QMADAKGSTA
SVKLGASAAY PDGATRDAEF SASGTVITFR GFLAAYEEGR DAGRYDEDGD GAGRGSSSGS
SAARETRLPD LAQGDQVAAE SLTAEGHDTS PPPRYTEASL TAALEERGIG RPSTFAATIS
VIVDRGYVLR RGQALVPSWL AFSVVRLLED HFGRLVDYDF TAAMESDLDR IARGEQDRVA
WLTRFYFGDE AAGSEGLQQL VSELGDIDAR GINSIDLGGG VTVRVGRYGP YLEATGPDGE
PQRASVPDDV APDELTLERA RELLATQGEG DRELGTDPAT GRTIVARSGR YGPYVTEVIP
DDAPAASDDA KPAKRKPAKP KPRTASLLQS MQLEAVDLEQ ALKLLSLPRV VGVDPESGDE
ITAQNGRYGP YLKKGTDSRS LETEDQIFDI TLEQALAIYA QPKQRRGQRA SSALRELGDD
PVSGKPVSVK DGRFGPYVTD GTTNATLRKD DEVESITPER AFELLAEKRA KGPAKKRTTA
RSSSRKAPAK SRS
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