Gene Bcav_0635 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0635 
Symbol 
ID7858436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp708732 
End bp710102 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content71% 
IMG OID643864715 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002880659 
Protein GI229819133 
COG category[R] General function prediction only 
COG ID[COG2270] Permeases of the major facilitator superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.636916 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCACG ACGACGCGCT GCCCGCTCCC ACCGAGCACC TCCCCGCCGC GCCAGGTGCT 
GCGGGAGCGC CGGCACCCCG GCGCCAGGTC GTCGCCTGGG GGTTCTGGGA CTGGGGCCAG
CAGGCGTTCC AGACGATCAT CCTCACGTTC GTCTTCTCCG TGTACCTGAC GACGGCGGTC
GCGGAACAGG TGAACGACTC CGACACCCGC GGCACCCAGG CGCTCTCCAA CGCACAGACG
ATCGCCGGCG TCGCCATCGC CCTGCTGTGC CCGCTCATGG GGGTGCTCGC GGACCGCTAC
GGCCGACGAC GGCGCCTCCT CGCGATCGCG ACGCTCGCCC TGGTCGCGTG CATGGTCGCG
ATGTTCTTCG TGCGACCGGA CCAGCAGTAC CTCGTGCTGG GCGTGACCCT CGTGGCTCTG
GCGTCCGTGT TCTCCGAGAT CGCCGGCGTG TTCTACAACG GGATGCTGCT GCAGATCGCG
ACGCCGACGA CGTTCGGTCG GGTCTCGGGG ATGGCGTGGG GCCTCGGATA TCTGGGCGGG
CTCGTGTCGC TCGTGATCTG CCTGTTCGCG TTCGTGCTGC CCGACGTCGG GCTGTTCGGC
GTCACCACCG ACGACGGCCT CGCGATCCGG GCCGTCGCCC TGTTCAGCGC GGTCTGGTGC
CTGGTGTTCT GCCTGCCGCT GCTCGTCCTC GGCCCGGACA CACCCGCCGG CGAGGGCTCG
CGCGGCAGCC TCAACCCGGT CACCGCCTAC CGCGACATCG GTCTGCGCAT CGCGCACATG
TGGCGGAACG AGCGCGGGCT CCTGCACTTC CTCGTTGCGT CCGCCGTGTA CCGCGACGGG
CTCGGCGCCG TCTTCGCCTT CGCCGGCGTG CTGGCGGCGT CCGCGTACGG ATTCAGCACG
ACCGAGGTCA TCTACCTCGG CATCGCGGCG AACCTCGGTG CCGGTGTCGG CACGTGGATA
GCGGGCCGGA TCGACGACGC CGTCGGCCCC CGCCGCCTCA TCGTCACCTC GCTGACGGCG
ATCGTCGTGC TCGGCGCCGT CGTGGCGACG TCGCCGTCGC CCGTCGTGTT CTGGGTCTGC
GGGATCGGGA TCTCGCTCTT CGTGGGTCCG GTGCAGTCGG CGTCCCGGTC GCTCCTCGCG
CGCATCACGC CCTTCGGGCA CGAGAACGAG AACTTCGGGC TGTACGCGAC GGCGGGGCGC
GCCGTGTCGT TCCTCGCGCC GGCGGCGTTC GCGCTCGCGA TCGCGCTGTT CGGGTTCAAC
CGCGCGGGGA TCATCGGCAT CGTGGCGGTG CTCCTGATCG GGCTGCTGCT GTTCCTCCCG
CTGCGCGTGC CCGCGAACGT GCACCTCGCG TCGACCGACG CGCCCAGATA G
 
Protein sequence
MSHDDALPAP TEHLPAAPGA AGAPAPRRQV VAWGFWDWGQ QAFQTIILTF VFSVYLTTAV 
AEQVNDSDTR GTQALSNAQT IAGVAIALLC PLMGVLADRY GRRRRLLAIA TLALVACMVA
MFFVRPDQQY LVLGVTLVAL ASVFSEIAGV FYNGMLLQIA TPTTFGRVSG MAWGLGYLGG
LVSLVICLFA FVLPDVGLFG VTTDDGLAIR AVALFSAVWC LVFCLPLLVL GPDTPAGEGS
RGSLNPVTAY RDIGLRIAHM WRNERGLLHF LVASAVYRDG LGAVFAFAGV LAASAYGFST
TEVIYLGIAA NLGAGVGTWI AGRIDDAVGP RRLIVTSLTA IVVLGAVVAT SPSPVVFWVC
GIGISLFVGP VQSASRSLLA RITPFGHENE NFGLYATAGR AVSFLAPAAF ALAIALFGFN
RAGIIGIVAV LLIGLLLFLP LRVPANVHLA STDAPR