Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0633 |
Symbol | |
ID | 7858434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 705522 |
End bp | 706097 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643864713 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002880657 |
Protein GI | 229819131 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGAGCT GGGAGGAGGC GCTCACGACT GTCGTGAGCG AGCGGGGTGC GCGGCTGCTG CGCACCGCGT ACTTGTTGTG CGGCGACCGC TCCGGTGCCG AGGACCTGGT CCAGGACGCG CTCGTGAAGA CGTTCGCCCG CCGCCGCACG ACGCCGAGGC TGCGGATCGA CGCGGCGGGG ACACGCGACG TCGTCGCCCT CGGTGAGGCG GAGTCGTACG TCCGGCGCGC GATCCTCACG CTCTACCTCG ACGAGGCGCG CCGTTCGGGC CGCTGGCGAA AGGTGCGCCA CCTCGTCGCG GCCCAGGAGC AGACCGCCGG GCACGAGTCG CGCGTGACCG GGCGGGTCGA CGTGGAGCGC GCCCTCGCGG TGCTCGCCCC GCGCGAACGC GCGTGCGTGA TCCTGCGCTT CTACGACGAC CTCACGGTGC CCCAGGTCGC CCGCGAGCTC GGGCTCGCGG AGGGCACGGT GAAGCGGTAC CTCAGCGACG CGTCGGCGAC GCTCGCCGGT CAGCTCGACC CCGGCGGCGC GGACGTCCGA CGACGACCGG CCCGCGAGAC AGGAGGATCG AGATGA
|
Protein sequence | MASWEEALTT VVSERGARLL RTAYLLCGDR SGAEDLVQDA LVKTFARRRT TPRLRIDAAG TRDVVALGEA ESYVRRAILT LYLDEARRSG RWRKVRHLVA AQEQTAGHES RVTGRVDVER ALAVLAPRER ACVILRFYDD LTVPQVAREL GLAEGTVKRY LSDASATLAG QLDPGGADVR RRPARETGGS R
|
| |