Gene Bcav_0633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0633 
Symbol 
ID7858434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp705522 
End bp706097 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content74% 
IMG OID643864713 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002880657 
Protein GI229819131 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGCT GGGAGGAGGC GCTCACGACT GTCGTGAGCG AGCGGGGTGC GCGGCTGCTG 
CGCACCGCGT ACTTGTTGTG CGGCGACCGC TCCGGTGCCG AGGACCTGGT CCAGGACGCG
CTCGTGAAGA CGTTCGCCCG CCGCCGCACG ACGCCGAGGC TGCGGATCGA CGCGGCGGGG
ACACGCGACG TCGTCGCCCT CGGTGAGGCG GAGTCGTACG TCCGGCGCGC GATCCTCACG
CTCTACCTCG ACGAGGCGCG CCGTTCGGGC CGCTGGCGAA AGGTGCGCCA CCTCGTCGCG
GCCCAGGAGC AGACCGCCGG GCACGAGTCG CGCGTGACCG GGCGGGTCGA CGTGGAGCGC
GCCCTCGCGG TGCTCGCCCC GCGCGAACGC GCGTGCGTGA TCCTGCGCTT CTACGACGAC
CTCACGGTGC CCCAGGTCGC CCGCGAGCTC GGGCTCGCGG AGGGCACGGT GAAGCGGTAC
CTCAGCGACG CGTCGGCGAC GCTCGCCGGT CAGCTCGACC CCGGCGGCGC GGACGTCCGA
CGACGACCGG CCCGCGAGAC AGGAGGATCG AGATGA
 
Protein sequence
MASWEEALTT VVSERGARLL RTAYLLCGDR SGAEDLVQDA LVKTFARRRT TPRLRIDAAG 
TRDVVALGEA ESYVRRAILT LYLDEARRSG RWRKVRHLVA AQEQTAGHES RVTGRVDVER
ALAVLAPRER ACVILRFYDD LTVPQVAREL GLAEGTVKRY LSDASATLAG QLDPGGADVR
RRPARETGGS R