Gene Bcav_0601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0601 
Symbol 
ID7861064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp667951 
End bp669309 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content77% 
IMG OID643864681 
ProductMannitol dehydrogenase domain protein 
Protein accessionYP_002880626 
Protein GI229819100 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0246] Mannitol-1-phosphate/altronate dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCCC CTCGGCTGAC ACGGGAGTCC GCGCGCGGCG TCTCCGCACG CCCCGGCGTG 
CGCGGGCCGC TCGTGGAGCC GGCCGCCGTC GGCGTCGTCC ACCTCGGCAT CGGGGCGTTC
CACCGGGCCC ACCAGGCGGT CTACACCGAA CGTGCCGCCG CGCTCGCGGG GGAGCGGGAG
TGGGGGATCC TCGGGGTCAC CGGGCGGCGT CCCGACGTCG CCCGCGTGCT CGACGCCTCG
GGCGGCGTCT ACGGCGTGCT CGTGCGGGAC GGCGCGGACG TGAGCGTCGA CGTCGTCGGC
GCGGTCGTGG AGGCGGCATC GCCGGACCAG GACGCCGAGC GCGTGGTCGC CGCGATCGCG
GCCGAGACGA CCGCCGTCGT CAGCCTGACG ATCACGGAGC ACGGCTACGC CGGACCCCCG
TTCTCCCCGC CGATCGAGCT GCTGGTCCGG GGCCTGCGGC GGCGGGCTGC GCACGGGGCG
CCGCTGTCCG TGCTCAGCTG CGACAACCTG GTCGACAACG GCGCGGTGCT GCGTCGCATC
GTCCGCGCCG CCGTCTCGGG CGACGACGGC GTCGCGCGCT GGGTCGACGA CGCCGTCCGC
TTCCCGCGCT CGATGGTGGA CCGGATCGTG CCCGCCACCA CGGCGGAGGA CCGCCGTGCG
GCGGCGGTGC TGACCGGGTT CGACGACGCC GGGCTCGTGG TCGCGGAGCC GTTCAGCGAG
TGGGTGATCG AGGACGACCT CGCCGAGCGG CGGCCGCGCT GGGAGCTCGC GGGTGCGCGG
GTCGTGCCCG ACGTCGAACC GTACGAGCGG CTCAAGCTGC GCACGCTCAA CGCCACGCAC
AGCCTGCTCG CGTACGAGGG CGAGGCGCGC GGGCACACGA CGATCGCCGA GGCGCTGGAC
GACGACGAGC TCGCGCGACG GGTCGAGGCC CTCATGGCGG AGTCCGGGCT GACGCTCGAG
CAGCCCCCGG GCATCGACGT CGTCGCGTAC CGGGCCGAGG TCCTGCGGCG GTTCCGCAAC
CGTGGGATGC GGCACACGGT CGCCCAGATC GGGCACGACG GCTCCCGCAA GCTGCCCATC
CGCGTGGGCG GGACGATCGG CGACCTCGTG GCGCAGGGGG TGACCCCCGA CGCGACGGCG
CGGGTGCTCG CCGCGTGGGC CGTGCACCTG CGTCGCGGCG CCGTCGTCGA CCCCCTCGCG
GACGAGCTCC AGGCGGCGGC CCGGGCCGCT CGCGACGCCG TCGAGCTCGC CGAGCTGGTG
CTGCGGCTGC CGGGGATTGT GCCGGACGCC GTCGCCGGCC GACGCGACGT GCGCGACGCC
GTCGCCGCAC ACACCGCGGA GATCCTCGCT CTGGCGTGA
 
Protein sequence
MSAPRLTRES ARGVSARPGV RGPLVEPAAV GVVHLGIGAF HRAHQAVYTE RAAALAGERE 
WGILGVTGRR PDVARVLDAS GGVYGVLVRD GADVSVDVVG AVVEAASPDQ DAERVVAAIA
AETTAVVSLT ITEHGYAGPP FSPPIELLVR GLRRRAAHGA PLSVLSCDNL VDNGAVLRRI
VRAAVSGDDG VARWVDDAVR FPRSMVDRIV PATTAEDRRA AAVLTGFDDA GLVVAEPFSE
WVIEDDLAER RPRWELAGAR VVPDVEPYER LKLRTLNATH SLLAYEGEAR GHTTIAEALD
DDELARRVEA LMAESGLTLE QPPGIDVVAY RAEVLRRFRN RGMRHTVAQI GHDGSRKLPI
RVGGTIGDLV AQGVTPDATA RVLAAWAVHL RRGAVVDPLA DELQAAARAA RDAVELAELV
LRLPGIVPDA VAGRRDVRDA VAAHTAEILA LA