Gene Bcav_0576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0576 
Symbol 
ID7861039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp637671 
End bp638744 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content75% 
IMG OID643864656 
Productphospho-2-dehydro-3-deoxyheptonate aldolase 
Protein accessionYP_002880601 
Protein GI229819075 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
TIGRFAM ID[TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCG TCGCCGCCGC GCCGCGCACG AACGACCTCC GGGTCCGGGC GCTCGAACTG 
CTGCCCACCC CCGCCGCGAT CCGCACCGAG GCGCCGCTCG ACGATGACGG CGCCGCGCTC
GTCGCGTCGT CCCGCCGAGG GGCCTCGGAC ATCCTGCGCG GCGCCGACGA CCGCCTGCTC
GTCGTCGTCG GTCCCTGCTC GATCCACGAC CCGGAGGCCG CGCTCGCCTA CGCCGCTCGG
CTCGCCCCGC TGCGGGAGAG GTTCGCGGAC TCGCTCGAGG TCGTCATGCG CGTCTACTTC
GAGAAGCCGC GCACCACGCT CGGCTGGAAG GGCCTCATCA ACGACCCGGG GTTGGACGGC
TCGCACGACG TGCCTCGCGG GCTGCGCCTC GCCCGGCGGG TGCTGCTCGA CGTCGTCGCC
GCCGGACTCC CCGCCGCAAC GGAGTTCCTC GAGCCGACGA CGCCGCAGTA CGTGGCGGAC
GCCGTCAGCT GGGGTGCGAT CGGCGCGCGG ACGCCGGAGA GCCAGGTGCA CCGGCAGCTC
GCGTCCGGGC TGTCGATGCC GATCGGGTTC AAGAACGCGA CGGACGGCGA CGTGCAGGCG
GCCATCGACG GCTGCGTCGC GGCGGCGGCC GAGCACACGT TCCTCGGGAT CGACGACGAC
GGCCGCGCGT CAGCCGTCGC GACCACCGGG AACCCGGACG GGCACGTGGT GCTGCGCGGG
GGACGGTCCG GGCCGAACTT CGATGCGGCG TCCGTGGCCG CCGCGCTCGA CCTGATCGGG
GCGGCGGGCC TGCCGCGCCG GCTCGTCGTC GATGCGAGCC ACGGCAACTC CGGGAAGGAC
CACGTGCGGC AGGCCGGCGT CGTCCGCGAG CTCGCGCAGC GGATCGGCGC GGGGGAGCGC
GGCATCGCCG GCGTGATGAT CGAGAGCTTC CTGGTGCCGG GGCGGCAGGA GCCGGCGCCG
ACGGGGCTCG TGTTCGGGCA GAGCGTGACC GACGCGTGCG TCGGCTGGGA CGAGACGGAA
GAGCTCCTCG CGGCGCTGGC CGTCGCCTCC GCCTCCCGCC GGTTGTCGGC CTGA
 
Protein sequence
MTTVAAAPRT NDLRVRALEL LPTPAAIRTE APLDDDGAAL VASSRRGASD ILRGADDRLL 
VVVGPCSIHD PEAALAYAAR LAPLRERFAD SLEVVMRVYF EKPRTTLGWK GLINDPGLDG
SHDVPRGLRL ARRVLLDVVA AGLPAATEFL EPTTPQYVAD AVSWGAIGAR TPESQVHRQL
ASGLSMPIGF KNATDGDVQA AIDGCVAAAA EHTFLGIDDD GRASAVATTG NPDGHVVLRG
GRSGPNFDAA SVAAALDLIG AAGLPRRLVV DASHGNSGKD HVRQAGVVRE LAQRIGAGER
GIAGVMIESF LVPGRQEPAP TGLVFGQSVT DACVGWDETE ELLAALAVAS ASRRLSA