Gene Bcav_0571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0571 
Symbol 
ID7861034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp632368 
End bp633258 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content68% 
IMG OID643864651 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002880596 
Protein GI229819070 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCTCGT TCACCGCGGC CGACGGCCGG CTGCGTGGAT GGCAGCTCGG ATTCACCGCC 
CCGCTGTTCG TCGTGCTGGC CCTGACGACG ATCCTGCCCA TCGTGTACGC CCTCGCCCTC
GCGCTCGGCG CGTCGGACGA CAGCCTGACC CCCCGTGCAC CGTTCAGCGG GGAGAACTTC
TCGGACGTCT TCGGCGGACG TGAGATCTGG TCGGCCCTCT GGCTCGCCGT CGTCTTTCTC
GTCGGGGCGC TCGCGCTCGA GCTGGCGCTC GGCGTTCTCA CGGCGCTCGT CCTCGACCGG
TTCCTCCCGA ACCGCAACGC CCTGCGGGTG CTGCTGCTCT GGCCGGCTGT GCTTCCGCCG
ATCGCTGTCG CCCTGGTGTT CAAGTACATC CTGCAGGGCG ACATCGGCAT GGTGTCCTAC
TACCTCGGAC TCGTCGGTAT CCACCAGGAG TGGCTGACGC AGCCGGGATC GGCGATGGCG
GTCATCATCG GGATCGACGT CTGGCAGTAC ACGCCGTTCG TCATCCTGCT GACCCTGGCG
GCGCTCAAGA CCGTGCCCGA GGAGGTCCTC GAGGCCGCCC AGCTCGACGG CGCCGGCGCT
GTCCGCAGCG CGTGGAGCCT CGTGCTGCCG ATCGTCCGGC CGGCCGTGAT CGCCATCGCG
TTGCTGCGGT TCATCGACGC GATCCAGGTG TTTCCCACCA TCTACGTGCT CACTCGTGGC
GGACCGGGGT CGAGCACCCA GCTCCTGACC TACTACAACT TCCAGGTCTT CTTCGGTCAG
CTGCGGTTCG GTGAGGGCGC CGCGATCGCC GTGTTCGTCG TCGTCTTCAC GCTGGTGTGC
GTGACGGTGT TCACGCGCCT CCAGCGACGA GCGGAACGGG CATGGGCATG A
 
Protein sequence
MSSFTAADGR LRGWQLGFTA PLFVVLALTT ILPIVYALAL ALGASDDSLT PRAPFSGENF 
SDVFGGREIW SALWLAVVFL VGALALELAL GVLTALVLDR FLPNRNALRV LLLWPAVLPP
IAVALVFKYI LQGDIGMVSY YLGLVGIHQE WLTQPGSAMA VIIGIDVWQY TPFVILLTLA
ALKTVPEEVL EAAQLDGAGA VRSAWSLVLP IVRPAVIAIA LLRFIDAIQV FPTIYVLTRG
GPGSSTQLLT YYNFQVFFGQ LRFGEGAAIA VFVVVFTLVC VTVFTRLQRR AERAWA