Gene Bcav_0570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0570 
Symbol 
ID7861033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp631538 
End bp632377 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content69% 
IMG OID643864650 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002880595 
Protein GI229819069 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATGA GGCGCACGAC GAGGTCCAGC CTCCCGGCGC GGATCGCGGC CTACGTCTTC 
ATCGCGCTCG TCCTCGTCGT GTTCACGCTG CCCACGCTGT ATGCCGTCCT CACCTCGCTC
CAGCCGCCCC AGGTCAGCCT GAACCCGGTC CCGCAATGGG TGTTCACGCC GACCCTCGAC
AACTTCGTGG CGCTCTTCGA CGAGTCCTCG TTCCTCGGGC CGGTCCTCAA CAGCGTCCAG
TCGAGCGTGG GCTCGGCCGC GCTGGCGCTC GCGATCTCCG CGCCGGCCGC CTACGCCCTG
AGCCGTGCAG GCGTCTCCTC CTCCGGAGCG ACGGGCCTGT GGCTGCTCGC GGCTCGCGCC
CTGCCCGCCA TCGGGCTCGC CGTCCCGGCG TACGCCATCT TCACCAGAGT GGGTCTGTCG
GACACCATCG TCGCGCTGCT GCTCGTGTAC CTGCCGTTCA ACGTGGCACT GGCGACGATC
ATGCTCAAGG TCTTCATCGA CGGGATCCCG CGCGAGCTCG ACGAGGCCGC CGCGCTCGAC
GGCGCCGGAC CGCTACGGAC GATGCTCCAG GTCGTGCTGC CCGTGGCCCG GCCGGGGCTG
GCGTCGGTCA CGATCATGAC GTTCCTCTTC GCGTGGAACA ACTTCCTGTT TCCCCTGGTC
CTCACCGGCT CGCAGTCCGC CACGATCCCC CTCGTGCTGC AGAAGTTCCT CGGGAGCTAC
ACGCTGCAGT GGAACCAGGT CATGGCGGGC GTCGTCCTGC TCTCGCTCCC CCTCATCGTT
CTCGGGGCGA TCTTCGGCAA GTACATGGTC GGCGGCCTCG CCGCCGGCAG CGTGAAATGA
 
Protein sequence
MGMRRTTRSS LPARIAAYVF IALVLVVFTL PTLYAVLTSL QPPQVSLNPV PQWVFTPTLD 
NFVALFDESS FLGPVLNSVQ SSVGSAALAL AISAPAAYAL SRAGVSSSGA TGLWLLAARA
LPAIGLAVPA YAIFTRVGLS DTIVALLLVY LPFNVALATI MLKVFIDGIP RELDEAAALD
GAGPLRTMLQ VVLPVARPGL ASVTIMTFLF AWNNFLFPLV LTGSQSATIP LVLQKFLGSY
TLQWNQVMAG VVLLSLPLIV LGAIFGKYMV GGLAAGSVK