Gene Bcav_0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0562 
Symbol 
ID7857928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp620987 
End bp622162 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content72% 
IMG OID643864642 
Productaminotransferase class I and II 
Protein accessionYP_002880587 
Protein GI229819061 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1168] Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.500594 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGAGCC CCCAGGACCT GGACGCCATC ACCGTCGACG ACCTCCGCGC ACGCGGCGGG 
ATCAAGTGGT CGACCTACCC GGACAGCATC GGCGCCTTCG TCGCAGAGAT GGACTTCGGT
GTGGCGCCGG GCATCGCCCG CGCGCTCCAC ACCGCCGTCG ACGACGCGCA GTTCGGCTAC
CTCCCGCCGA GCCTCGTGCG CACGATGTCC GAGGCCGTCT CCGAGTGGTA CGCCCGCCGC
CACGGGTGGC AGATCTCGCC CGAGCGGATC CATCCCCTCC CCGACGTCAT CAAGGCCCTC
GAGGTCGCGA TGGAGCACTT CTCCGGTCGC GGCGAGAAGG TCATCGTGAC GACGCCCGCC
TACATGCCGT TCCTCAAGAT CCCGGAGCTG TTCGGGCGGG AGATCATCCG GGTGCCCATG
CTGCTCGACG ACGACGACGG CGTGTGGCGG CTCGACCTCG ACGGCATCGG TCGCGCGTTC
GCGGACGGCG CCGGACTGCT CGTGCTGTGC AACCCCTACA ACCCGCTCGG CCGCGTGTTC
GGCCGCGAGG AGCTGGCGGC CCTGGCCGAC GTCGTCACCG CCCACGGCGG GCGGGTGTTC
TCCGACGAGA TCCACGCCCC GCTCGTCTAC CCGGGCGCCC ACCACGTGCC GTACGCGTCG
ATCTCCGAGG CGGCGGCGAG CCACACCGTG ACGGCGACGT CGGCGTCGAA GGCCTGGAAC
CTGCCCGGCC TCAAGTGCGC TCAGCTCCTG CTGTCGAACG CCGCCGACGC CGTGGAGTGG
GAGAAGTTCG GGTTCATGGC CTCGCACGGC GCGGCCAACC TCGGGGTCAT CGCGAACACG
GCGGCGTTCA CGTCCGGCGA GGGGTGGCTC GAGGAGATCG TCACCTACCT CGACGGGAAC
CGGCGCCTGC TGGGCGAGCT GCTCACGGAG CACCTGCCCG ACGTCGGCTA CTCGCCGCCC
GAGGGCACCT ACCTCGCCTG GCTCGACTGC CGGGAGCTCG AGCTCGGCGC CGCGCCCGGC
GACTTCTTCC GCGAGCACGC CGGCGTGGCG ATGGTCGACG GCGCGGCGTG CGGCGAGGAG
GGCTTCGTGC GGCTCAACTT CGCCCTGCCC CGGCCCGTGC TGGCGCAGGC GATCGAGCAG
ATGGGTACCG CCGTCGCGGG GCGCCACGCC GCCTGA
 
Protein sequence
MVSPQDLDAI TVDDLRARGG IKWSTYPDSI GAFVAEMDFG VAPGIARALH TAVDDAQFGY 
LPPSLVRTMS EAVSEWYARR HGWQISPERI HPLPDVIKAL EVAMEHFSGR GEKVIVTTPA
YMPFLKIPEL FGREIIRVPM LLDDDDGVWR LDLDGIGRAF ADGAGLLVLC NPYNPLGRVF
GREELAALAD VVTAHGGRVF SDEIHAPLVY PGAHHVPYAS ISEAAASHTV TATSASKAWN
LPGLKCAQLL LSNAADAVEW EKFGFMASHG AANLGVIANT AAFTSGEGWL EEIVTYLDGN
RRLLGELLTE HLPDVGYSPP EGTYLAWLDC RELELGAAPG DFFREHAGVA MVDGAACGEE
GFVRLNFALP RPVLAQAIEQ MGTAVAGRHA A