| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0556 |
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| Symbol | |
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| ID | 7857922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 612558 |
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| End bp | 613850 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643864636 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_002880581 |
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| Protein GI | 229819055 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.71623 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATGG GCACACTCGA TCGGCGCCAG TTCCTCGGCG GGCTGGGGGT GATGACCGGC
GCCGCCCTGA CCGCCAGCCT CACGGGCTGC GGTTCGAGCA CGTCGATCTC CTCCGACCCG
GACGAGCTGG TGCTCTGGTA CTGGAACCGC TCGGTCAGCC CGACCCTCCT GGGCCAGGCC
GCCGAAGGCA TCCCGGGGTC GACGAAAAGG CTGCGGGCCG ACGTCATCGG CGGCGGGTAC
GACAACAAGT TCCGGACGTC GCTCGCGGGT GGCGCCTACA TCCCGGACGT CGCAGCGATC
AACTCCAACT GCTCGCTGTA CTTCCCGAGC GAGGACAAGT TCTTCGACCT CAACGAGCTC
GGCGCAGCGG ACCACTCCGC GGGCTACTTC GACTGGAAGT GGGACCTCGG CACCTCGCCG
ACCGGCCGCC AGCTCTTCTT CCCGCTCGAC ACCGGACCGA CGGGCTTCTA CTACCGTGCG
GACGTCTTCG ATGAGGCGGG CCTCCCGTCC GACCCGGACG ACGTCAGCGC CGCCGTCGCC
GACTGGGACG CCTGGATCGA GCTCGGCACG GAGCTCCGCG CGACGGCGGA CGTGGCCCTG
ATGAACACCG CCGGCATGGT GTTCGGCCAG TTCCTCAACG CCTCGCCCGA GCGGTACTTC
GACCGCGACA ACCGACCGCT CTACTCCGAG GACGGCAGCG CCGTCCGCGA GGCGTGGGAG
GTCGCGATCC GGGCGAGCGA GGCCGGCATC ACGGCGAAGC TGCCGGTTCC CACGGAGCAG
AACTCGGCGT GGTCGTCGGG CCGCACGGTC GGCCACATCG AGGCCGTGTG GTGGGCGCAG
ATCCTCGGCG ACACGGCGCC CGACACCGCC GGCTCGTGGC GCATCGCCCA CCAGCCCGGC
CCGCCCGGGA ACAGCGGTGG CTCGTTCTTC TGCATCCCGA GCACGTGCAA GGACCCCGAG
GCCGCGTTCG CGTTCGTCAC CTGGCTCAAC ACACCCGAGA ACCAGGCCGC CACGTTCAAC
GAGGTCCAGC TCTTCCCGTC CTCGCCGGAG GCGTTCACCG CCGGGGAGAT GGTGAGCGAC
ACCGGCTTCT TCGGCGAGCA GGACCCGCTC GAGTTCTTCG CGGCCGTCGC TCCCGATGTC
CCGCCCACGT TCGTCAGCAC GTACGAGCCG CAGGCCGCCG CGTTCGCCAC CGAGCTCACG
AACGTCGAGG CCAGCGGCAA GGATCCCGAG CAGGCCTGGG CCGACGCCGT CACCGAGGCT
GACCGCAACC TCGCGAAGCG AGGGGTGATC TGA
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| Protein sequence | MQMGTLDRRQ FLGGLGVMTG AALTASLTGC GSSTSISSDP DELVLWYWNR SVSPTLLGQA
AEGIPGSTKR LRADVIGGGY DNKFRTSLAG GAYIPDVAAI NSNCSLYFPS EDKFFDLNEL
GAADHSAGYF DWKWDLGTSP TGRQLFFPLD TGPTGFYYRA DVFDEAGLPS DPDDVSAAVA
DWDAWIELGT ELRATADVAL MNTAGMVFGQ FLNASPERYF DRDNRPLYSE DGSAVREAWE
VAIRASEAGI TAKLPVPTEQ NSAWSSGRTV GHIEAVWWAQ ILGDTAPDTA GSWRIAHQPG
PPGNSGGSFF CIPSTCKDPE AAFAFVTWLN TPENQAATFN EVQLFPSSPE AFTAGEMVSD
TGFFGEQDPL EFFAAVAPDV PPTFVSTYEP QAAAFATELT NVEASGKDPE QAWADAVTEA
DRNLAKRGVI
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