| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0553 |
|---|
| Symbol | |
|---|
| ID | 7857919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 609761 |
|---|
| End bp | 610546 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643864633 |
|---|
| Product | protein of unknown function DUF81 |
|---|
| Protein accession | YP_002880578 |
|---|
| Protein GI | 229819052 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0730] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.904982 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGCCCG ACATCGACCT GCTCACGATC CTGCTGCTGG TGCTCGCCGG CCTCGCCGCG
GGGTGGGTCG ACGCCGTCGT CGGCGGCGGC GGGCTGATCC AGCTGCCGGC CCTGCTGCTG
GTGCCCGGGA TCACCCCGAT CGAGGCGCTC GCGACCAACA AGCTGGGCTC GATCATGGGC
ACGTCCACGA GCTCGATCAC CTACTACCGC CGCGTGCAGC CCGACCTGAC GACGGCGGCC
CCGATGGCCC TCGCCGCCCT CGCCGGGGCA AGTGGCGGTG CCCTGCTGGC CTCGCAGATA
CCCGGCGAGC TGTTCACGCC GATCATCCTC GTGGTGCTCG TGGGCGTCTT CGTGTTCACG
CTGGCCAGGC CGCGGCTCGG CGCGCACACG CAGCTGCGCT GGGAAGGCAA CCGGCACCGG
TGGACCGCGG CCGGGCTCGG CGTCGCCATC GGTCTCTACG ACGGGCTGCT CGGCCCCGGC
ACCGGCACGT TCCTCGTCAT CGCGCTCGTG AGCGTGCTCG GCTACGCGTT CCTGCCGGCG
TCGGCGATCG CGAAGATCGT CAACTTCGCG ACGAACTTCG GGGCGCTCGT CGTGTTCGTC
CCGCACGGCG TCGTGCTCTG GGGTCTGGGG CTGTGCGTCG GGGCGGCGAA CCTCGTCGGC
GCCTACATCG GCGCCCGGAT GGCTGTCGCC AAGGGCAGCG CCTTCGTGAG GGTGGCGTTC
GTCGTCGTCG TCGGCGTGCT CATCGTCCGG CTCGGCTGGG ACGTCGTCGC CGACTGGCTC
TCCTGA
|
|---|
| Protein sequence | MPPDIDLLTI LLLVLAGLAA GWVDAVVGGG GLIQLPALLL VPGITPIEAL ATNKLGSIMG
TSTSSITYYR RVQPDLTTAA PMALAALAGA SGGALLASQI PGELFTPIIL VVLVGVFVFT
LARPRLGAHT QLRWEGNRHR WTAAGLGVAI GLYDGLLGPG TGTFLVIALV SVLGYAFLPA
SAIAKIVNFA TNFGALVVFV PHGVVLWGLG LCVGAANLVG AYIGARMAVA KGSAFVRVAF
VVVVGVLIVR LGWDVVADWL S
|
|---|
| |