Gene Bcav_0545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0545 
Symbol 
ID7857911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp600856 
End bp601653 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content73% 
IMG OID643864625 
Productprotein of unknown function DUF990 
Protein accessionYP_002880570 
Protein GI229819044 
COG category[R] General function prediction only 
COG ID[COG3694] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.931228 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.935473 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACGC TGCGCCGTCA CGCGCGCTTC ACCGCCGCCG CGTTCGTCCA GGCGCTCGGC 
CGGGATGCGC AGTTCCGCGC CCAGGCCTGG ACGACGATCG TCGTCGGCCT CATCGAGGTG
GCGGTCGGGC TCGTCCCGGC GCTGCTGGTG TTCCAGCACA CCGACGAGGT GAACGGCTGG
GACGTCGGGC TCGTCATCGC CGTGACCGGG ATGGCGCAGG TCGCGATGGC CCTGCTCGGC
GCGTTCGTGG TGCCGAACCA GGCGAAGATG ACCGACTACG TCCGCCGCGG CGAGCTCGAC
GGCGTCCTCA TCCGGCCCGT CTCGACGCAG TGGTACGCCG CTGTGCGCTG GATGCAGCCG
TCCGAGCTGT GGAGCGGGCT GGCCGGGCTG CTGCTCGTCG CCGTCGGTCT CGCCGAGGCC
GGAGCTCGTC CCAGCGCCGC GGACGTGGCG CTGGCCGCGC TGTGGTTCGC CGTCGGCCTG
GTGGCCGTCG CGCTGGTCTG GACGAACCTG GGCTACCTGG CGTTCTGGCT GGAGTCGGTC
GACTCGGTCA CCGACCTCAT GGCGACCCTG CTGTCCGCCG GGCGGTATCC GGTCGCGTTC
TTCCCGGCGG CCGTGCGCAC GATCCTGCTC GTCGTGATCC CGATCGGGCT CGCCACGACC
CTGCCGGTCA CGGCGCTCGA CGGCGGCTCC GACCCGCGGT TCGCGGTGGC GGGTGTCGGC
TGCGTCCTCG CGGGAGCGCT GCTCACCCGC TGGCACTTCG TGGTGGCGCT GCGCCGGTAC
GCGAGCGCGA GCTCGTGA
 
Protein sequence
MRTLRRHARF TAAAFVQALG RDAQFRAQAW TTIVVGLIEV AVGLVPALLV FQHTDEVNGW 
DVGLVIAVTG MAQVAMALLG AFVVPNQAKM TDYVRRGELD GVLIRPVSTQ WYAAVRWMQP
SELWSGLAGL LLVAVGLAEA GARPSAADVA LAALWFAVGL VAVALVWTNL GYLAFWLESV
DSVTDLMATL LSAGRYPVAF FPAAVRTILL VVIPIGLATT LPVTALDGGS DPRFAVAGVG
CVLAGALLTR WHFVVALRRY ASASS