| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0544 |
|---|
| Symbol | |
|---|
| ID | 7857910 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 599814 |
|---|
| End bp | 600530 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643864624 |
|---|
| Product | glycoside hydrolase family 16 |
|---|
| Protein accession | YP_002880569 |
|---|
| Protein GI | 229819043 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2273] Beta-glucanase/Beta-glucan synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.673841 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCC TGCTGTGGTC CGACGACTTC GCCGACGACG GCGCGCCGGA TCCCGCGCGA
TGGAGCCACG CCGTGGGCGG CCACGGCTGG GGCAACGACG AGCTCCAGTT CTACACGTCG
GACCGGGCGC GCAACGCACG GGTCTCCGGC GGCCGTCTCG TGATCGAGGC GCACGCCGAG
GACTGGCAGG ACCGGCGCTT CACGTCCGCG CGGCTCGTCT CGCGCGCCGC CTGGCTCCAC
GCTCGCGTCG AGGTGACGGC CCGGCTGCCG ATCGGTCGCG GCACGTGGCC GGCGATCTGG
ATGCTGCCGT CGACGCCGGG CGAACGACGT TGGCCGGACG ACGGCGAGAT CGACGTCATG
GAGCACGTCG GGCACGATCC CGGCGTCGTG CACGCCAGCA TCCACACGGC CGCGTACAAC
CACGTCGACG GCACGCAGCG CACGGCCACC ACGGCGGTCC CCGACGCGCA GGAGGCGTTC
CACACGTACG CGGTGGACTG GGACGCGGAG TCCATCACCT GGTCCGTCGA CGGCGAGGCG
TCCTTCACCT ACGCGCGGGA GGCGGCTGCC GAGCGCGACA CGTGGCCCTT CGACACGCCG
TTCCACCTCA TCCTCAACCT CGCCGTCGGA GGGGGCTGGG GCGGGGCGCA GGGCGTGGAC
GACGCCGCGT TCCCGGCCCG GTTCGAGATC GACTCGGTCC GCGTGCTCGG CCGCTGA
|
|---|
| Protein sequence | MTTLLWSDDF ADDGAPDPAR WSHAVGGHGW GNDELQFYTS DRARNARVSG GRLVIEAHAE
DWQDRRFTSA RLVSRAAWLH ARVEVTARLP IGRGTWPAIW MLPSTPGERR WPDDGEIDVM
EHVGHDPGVV HASIHTAAYN HVDGTQRTAT TAVPDAQEAF HTYAVDWDAE SITWSVDGEA
SFTYAREAAA ERDTWPFDTP FHLILNLAVG GGWGGAQGVD DAAFPARFEI DSVRVLGR
|
|---|
| |