Gene Bcav_0523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0523 
Symbol 
ID7857887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp579627 
End bp580745 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content77% 
IMG OID643864601 
Producthypothetical protein 
Protein accessionYP_002880548 
Protein GI229819022 
COG category[S] Function unknown 
COG ID[COG2855] Predicted membrane protein 
TIGRFAM ID[TIGR00698] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.339912 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGAGC CGACCATCGC CGCGACCCCC GCACCCGCAC CCGGGCGGGG GAACGCCGTC 
GTCCGCGACG AAGCGCACGA GCCGTCGGGT GCGCGTGGCC GACGCCTCCC CTGGCTCGCC
GGTCTGGCCC TCGCCGTGGC GATCGCCGCG CCGGCGACGC TCGTCGGGCG GGCGTTCCCG
CTCCTCGGCG CACCGGTCTG CGCGATCCTG CTCGGCGCCG TCGTCGCCGC GGCGCTCCGC
GGCAGGGCCG CGGCCACGCT CAAGCCCGGC CTCGCCGTCG CCAGCCGGCC CGTGCTCCAG
CTCGGCGTGA TCCTGCTGGG CGCCCAGCTG TCGCTCGCGG AGGTCGCGCG CGTCGGCGCC
GACGCCGTGC CCGTCATGCT CGTCACGCTC GCCGTCTGCC TCCTCGCCGC GTGGGCGCTC
GGCCGGGCGA TGCGCGTCGA GTCCGACCTG CGCACGCTCA TCGGCGTGGG CACAGCGATC
TGCGGCGCGT CGGCGATCGC TGCCGTCACC GGCGTCCTGC GGCCCGCGAG CGAGAAGGTC
GCTTACGCCC TGTCCACCGT GTTCGTCTTC AACATCGCAG CGGCTCTCGC GTTCCCGCCG
CTCGGGCACG CCCTCGGTCT CGACGCGCAC ACGTTCGGCG TCCTCGCCGG CACGGCCGTC
AACGACATGT CGTCGGTCGT GGCCGCCGCC ACCGCGTTCG GGCCGGATGC CGCGCACGAC
GCCGTCGTCG TCAAGCTCAC CCGCACCCTG ATGATCGTGC CGATCTGCGC GGTCCTCGGC
GTCGTCGTCG CCCGGCGCGG ACGGCGCGGC GCCACCGCCG GCGGGACGGA CGCCGGCGAC
GGCGGCACGG GTCGGCGGGC GCTGCTGCGC GCCGTCCCGT GGTTCCTCCT CGGGTTCCTC
GCGCTCGCCG GGGCGAACAG CGCCGGCCTG GTGCCGACGT CGGCGAGTGC CGCGCTCACG
ACCGCCGCGG GATTCCTCGT GACCGTCGCG CTCGCGGCGA TCGGCCTGTC GACCGACCTG
GCCGGGCTGC GCCGCGCGGG AGCGCGCCCC CTGCTCCTCG GGGGCGCGCT CTCGCTCATC
GTGACCGGCA CGAGCCTGGC GATGCTCACC TGGAGGTGA
 
Protein sequence
MPEPTIAATP APAPGRGNAV VRDEAHEPSG ARGRRLPWLA GLALAVAIAA PATLVGRAFP 
LLGAPVCAIL LGAVVAAALR GRAAATLKPG LAVASRPVLQ LGVILLGAQL SLAEVARVGA
DAVPVMLVTL AVCLLAAWAL GRAMRVESDL RTLIGVGTAI CGASAIAAVT GVLRPASEKV
AYALSTVFVF NIAAALAFPP LGHALGLDAH TFGVLAGTAV NDMSSVVAAA TAFGPDAAHD
AVVVKLTRTL MIVPICAVLG VVVARRGRRG ATAGGTDAGD GGTGRRALLR AVPWFLLGFL
ALAGANSAGL VPTSASAALT TAAGFLVTVA LAAIGLSTDL AGLRRAGARP LLLGGALSLI
VTGTSLAMLT WR