Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0396 |
Symbol | |
ID | 7860653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 448657 |
End bp | 449613 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 643864472 |
Product | RNA polymerase sigma factor SigJ |
Protein accession | YP_002880422 |
Protein GI | 229818896 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.766224 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTCG GGACCGCCGA GCTCGCCGAC GCCTTCGAGG CCGAGCGTCC CCGGCTGCTG CGCGTCGCGT ACCGGCTGAC GGGCAGCGTC GCCGACGCCG AGGACGCCGT GCAGGAGGCC TGGCTGCGCC TCGACCGGGC GGAGTCCGCA GCGATCCGCG ACCTGCCCGC CTGGCTCACG ACGGTCGTCA GCCGCATCTG CCTCGACCGG CTCACGTCGG CCGCCGCCCG CCGCGAGACA TACGTCGGGA ACTGGCTGCC CGAGCCGGTC GTGACGGCGT TCCCGACCCC CGGGCACGCG AGCGCCGCGC CGGACCCCCT GGACGCCGTC GTCGCCGACG CCGACGCGCG GTACGCCGCC CTCGTCATCC TCGAGGCGCT CCCGCCGAAC CAGCGCGTCG CGTTCGTGCT GCACGACGGC TTCGGCGTGC CCTTCGCCGA CGTCGCCGAC GTGCTCGGGA CGTCCCCCGC GAACGCGCGC CAGCTCGCGG CGCGCGCCCG TGCCGGCGTG GCCGACCCAC CTCCGGCGTC GGACGCCGAG ACGCGCCTGC GCGCCGTCGA GCAGCTCGCC GCCGCCCTCT CGGCCGGCGA CCTGGACGCG ATCGTCGCCG TCCTGCACCC GGACGTCGTC GCCCGCGGGG ACTCCGGCGG CACGACGGCG ACGGCGCTGC ACGCGGTGCG CGGCTCCGAC AAGGTCGCCC GCTTCTTCCT CGGGCTCCTC GACAAGTACG GCACGCACGT CATCACGACG GCGCGGCCCG TGCTCGTCAA CGGCGAGCTC GGCTTCCTGC TCGCGGGCTC GCCCGGCGAC GCCACGCACG ACCCGATCCC GCCCCGCGTC ATGGCGCTCG GCGTGCGCGA CGGCCGCATC GCTGAGCTGT ACGACCTGGC GAACCCCGCG AAGCTGCGCC ACGTCCGGCT GCCCGACGGC ACGCGCCCCG TGCCGGAGGC GGACTGA
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Protein sequence | MSVGTAELAD AFEAERPRLL RVAYRLTGSV ADAEDAVQEA WLRLDRAESA AIRDLPAWLT TVVSRICLDR LTSAAARRET YVGNWLPEPV VTAFPTPGHA SAAPDPLDAV VADADARYAA LVILEALPPN QRVAFVLHDG FGVPFADVAD VLGTSPANAR QLAARARAGV ADPPPASDAE TRLRAVEQLA AALSAGDLDA IVAVLHPDVV ARGDSGGTTA TALHAVRGSD KVARFFLGLL DKYGTHVITT ARPVLVNGEL GFLLAGSPGD ATHDPIPPRV MALGVRDGRI AELYDLANPA KLRHVRLPDG TRPVPEAD
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