Gene Bcav_0386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0386 
Symbol 
ID7859079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp434425 
End bp435447 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content75% 
IMG OID643864462 
Productputative transcriptional regulator, Crp/Fnr family 
Protein accessionYP_002880412 
Protein GI229818886 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGTGC AGGCGACGGC GACAGCTGTG TCGTGGATCC CGTCCGAGTC GGTGACCGGG 
GCGTTGCGCG CGGGCTTCGA CCTGCGGCTG TCCCACTACG ACTCACCCCC TCCGGCGAGG
CTGTCCTCCC CGGACGAGGT CCGGCGTCTC CGCGACGCCG ACGGGTTCCG GTTCGCGAAC
GTGCTGGGGG TTTGGGCCGA CGTCGACGAC GACGGGGTGC ACGACGTCGG GATCTCGCCG
TCGTCGGGGC TCGCCATGGG GGCGACGACG ACGCGGCTCG CGGGGCTCGC TATCCGGTTC
GCGGCGGTGT CCCTGCCCGT GCTGCGCCAT GAGCCGGAGG TGCTGGGCAG CGGGGTGCGG
GTCGTGCAGA CGGTCGGCGG TCGCACGGGT GTGCCGCTGC CGCGCCCGGT GCCGCACCCG
CCGTTCGTCC AGTGGTCGGC GCCGACCGTG TGGACGACGC TCGCGGTGAC GCTCCGGCCC
GACGGCACGA GCGACGTCGA GCTCCTCGGC GCGAGCGCGT TCCCGCGGCA CTGGGTCTAC
GGGCCCGACG GCACGCTCGT GGCGAAGAGC GGGCTCACGG ACCCCGACGG CTGGCTCAAG
CACTCCTTCG GGGAGCGGAC GCCGTGGAGC AGCTCGGACT CGTCGGTGCT GGTCGCTGAG
GCGGAGAGCG CGCTCGAGCG GGAGCTGTCG GCGCTCATCA TGCGCGGCGG CGCTGAGCCC
GAGATCCGGC GTGTCGGTGC CGGCGCCGCC GTGATGCGCC AGGGTGAGCC TGGCGACGAG
CTCTTCCTCG TGCTCGACGG CGTCCTCGAC GTGGCTGTCG ACTCGACGAT CGTGGCAGAG
GTCGGGCCGG GCGCCGTCAT CGGCGAACGT GCGCTCCTGG AGGGTGGTCG GCGCACGGCG
ACGGTGCGGG CGCGGACCCC GGCGCGGCTC GCCGTCGCGG GGGCCGACGC CGTGGACCTC
GACCGGCTCC GCGAGCTCGC CGCGGGTCAC CAGCGGGAGA TCGGCGCGAC GCCGGTCGCC
TGA
 
Protein sequence
MRVQATATAV SWIPSESVTG ALRAGFDLRL SHYDSPPPAR LSSPDEVRRL RDADGFRFAN 
VLGVWADVDD DGVHDVGISP SSGLAMGATT TRLAGLAIRF AAVSLPVLRH EPEVLGSGVR
VVQTVGGRTG VPLPRPVPHP PFVQWSAPTV WTTLAVTLRP DGTSDVELLG ASAFPRHWVY
GPDGTLVAKS GLTDPDGWLK HSFGERTPWS SSDSSVLVAE AESALERELS ALIMRGGAEP
EIRRVGAGAA VMRQGEPGDE LFLVLDGVLD VAVDSTIVAE VGPGAVIGER ALLEGGRRTA
TVRARTPARL AVAGADAVDL DRLRELAAGH QREIGATPVA