Gene Bcav_0380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0380 
Symbol 
ID7859073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp425711 
End bp426598 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content75% 
IMG OID643864456 
ProductHAD-superfamily hydrolase, subfamily IIB 
Protein accessionYP_002880406 
Protein GI229818880 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.890791 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCGG AGCTCTCCGG GAAATCTGCC GACGCCGACG ACGCCGCGGG TCGCCCGGTC 
TTCGACGCCG CCATGGTCAC GTGGCCGGCG GGGCCGGACG CGCTGGTCGC CCTGGACATC
GACGGCACGC TCCTCGGGCA CGACGGCTCG ATGAGCGTGG GCGTGCGGGA CGCCGTCGCC
GCGCTGCGGG AGGCGGGCAC GCATCTCGTC CTCTCGACGG GCCGCTCCGT GCCGGCCGTG
CTGCCGGTCG CGGAGGAGCT CGGGCTCGAT CGCGGGTGGG CGGTGTGCTC GAACGGAGCC
GTCACCATCA CGCTCGACCC GGAGTCCGAG AAGGGGTACG AGTTCGCGGA CCTCGTGACG
TTCGACGCCG GGCCGGCCGT GCGGACGCTG CTCGCCGAGC AGCCGGGGGT GATCGTCGCC
GTCGAGGACC TGGGCCGCGG GTTCAAGGTC TCCGCGCCGT TCCCGATGGG GGAGCTCGGC
GGCGAGGTCG AGGTCGTGGA CCTCGAGGAG ATGCTCGCCG AGCCCGCGAC GCGCGTGACG
CTGCGCGCGC CGCAGCTCAT GCCCGCGGAC TTCGCGGACC TCGTCGACCG GGTCGGCCTG
CACGGCGTCG CGTACGCCGT CGGCTGGACC GCGTGGCTCG ACCTCACGCC CGACGGCGTC
TCGAAGGCGA GCGCGCTCGA GCAGGTGCGA GGCTGGGCCG GCGTCGCGCC GGAGCGGACG
CTCGCCGCCG GCGACGGCAA CAACGACCGC GAGATGCTCC GCTGGGCGGG GCTCGGTGTG
GCGATGGGCG GTGCCGACGC CGACACGGTC CTCGCCGCTG ACGCGCGCAC CGGGCCGGTG
GAGGACGACG GCGTCGTGCC CGTCCTGCGC GCTCTCCTGC GAGCCTGA
 
Protein sequence
MSAELSGKSA DADDAAGRPV FDAAMVTWPA GPDALVALDI DGTLLGHDGS MSVGVRDAVA 
ALREAGTHLV LSTGRSVPAV LPVAEELGLD RGWAVCSNGA VTITLDPESE KGYEFADLVT
FDAGPAVRTL LAEQPGVIVA VEDLGRGFKV SAPFPMGELG GEVEVVDLEE MLAEPATRVT
LRAPQLMPAD FADLVDRVGL HGVAYAVGWT AWLDLTPDGV SKASALEQVR GWAGVAPERT
LAAGDGNNDR EMLRWAGLGV AMGGADADTV LAADARTGPV EDDGVVPVLR ALLRA