Gene Bcav_0372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0372 
Symbol 
ID7859065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp414645 
End bp415829 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content72% 
IMG OID643864448 
Productbifunctional protein (secreted sugar binding protein/sugar hydrolase) 
Protein accessionYP_002880398 
Protein GI229818872 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.785262 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTCGTG CACTGCGTTC GATCGTCCTG TTCGCGCTCG CCTCGCTGAT GCTGGTCACG 
ACCGCCTCGT GGTCGTCGGC GGCACCGTCC GAGCCACCAC CGCCGGGCGG TGCCGAGAAC
GGCACCCGCC TCATGGAGGG TCCGGCGTTC TACCCGCGCA CGATCCGCCT CGCCCACGCC
GGGGCGGACG ACGGCGCGAT CATCGCGAGC GTCGTCACGT TCGCCGACGG CCTCGGCCAC
GGCGCGATCT TCCGGAGCGA CGACGACGGC CGCAGCTTCC AGCGCATCGG CACCGTCACC
GACCCGGCCA CGGCCGACGG GCTGTGCTGC GCCACCCTCT TCGAGCTCCC GCAGCAGGTC
GGTGAGCTCC CGGCCGGAAC CCTGCTCTGG TCGGCGTCGG TCGGCCAGCA GGCGCCGGAC
CGCAGGATGA CGCTCCCGGT CTGGGCGAGC ACGGACCAGG GCCGCACGTG GAGCAAGGTC
TCGACGATCG CCACCCAGCC GAACACCGGC GGCCTGTGGG AGCCGGAGTT CGCAGTCGCC
CGCGACGGGT CGCTCGTCGT CTACGTCTCC GACGAGAGCC AGCAGCCCAC GCACAGCCAG
ACGCTCGTCC AGGCGACCTC ACCCGACGGG GTGCACTGGT CCGAGCTAGA GAACATCGTG
GCGGCGCGGG ATCCCGACCT CCGGCCCGGC ATGCCGCTCG TGAGGCAGCT GCCGAACACC
ACGTACCTCA TGAGCTACGA GATCTGCGGG CCGGGCCAGG AGTGCAGCCA GCGGACGCGC
CGCTCGCTCG ACGGCGTCCA CTGGGGTCCC GAGACCTGGC TCGGCGTCCG CGTCCGTACC
GCCGACGGTG CGCACTTCCG GCATGCGCCG ACGATCAGCT GGTACGACGA CGGCACCCGC
AACGGACGCC TGCTCGCCGT CGGCCAGATG CTCTACGGCG CGGACGGCAC GGTGCAGCCC
GGCAACGGTC GGACGATCTT CACGAGCGAC CTGCTCCCGG AGCTCCCATG GGGCACCGGC
CCGGCCCCGC TGGCCATCGC CGAGCCGTGG AACAACTTCT GCCCGAACTA CTCCTCGAGC
CTGCTGGCGA TGCCGGAGCG TGACGAGCTG CTGGAGCTCG CGAGCGGCTA CGACGACGTG
GGGGAGTGCA CGACGTACTT CGCCGTGGGG GACCTGCCGG ACTGA
 
Protein sequence
MRRALRSIVL FALASLMLVT TASWSSAAPS EPPPPGGAEN GTRLMEGPAF YPRTIRLAHA 
GADDGAIIAS VVTFADGLGH GAIFRSDDDG RSFQRIGTVT DPATADGLCC ATLFELPQQV
GELPAGTLLW SASVGQQAPD RRMTLPVWAS TDQGRTWSKV STIATQPNTG GLWEPEFAVA
RDGSLVVYVS DESQQPTHSQ TLVQATSPDG VHWSELENIV AARDPDLRPG MPLVRQLPNT
TYLMSYEICG PGQECSQRTR RSLDGVHWGP ETWLGVRVRT ADGAHFRHAP TISWYDDGTR
NGRLLAVGQM LYGADGTVQP GNGRTIFTSD LLPELPWGTG PAPLAIAEPW NNFCPNYSSS
LLAMPERDEL LELASGYDDV GECTTYFAVG DLPD