Gene Bcav_0371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0371 
Symbol 
ID7859064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp413128 
End bp414372 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content72% 
IMG OID643864447 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002880397 
Protein GI229818871 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGAA CCGTGCCCAA CCCGTACGCC CAGATCCTGA GGAAGCCGGG CGCCCTCCAG 
TTCTCCAGCG CCGGGGTGCT GGCTCGCTTC CCGATGTCGA TGGTCGGCAT CGGGATCGTG
CTCATGATCT CGGAGCTGTA CGACTCGTAC GGGCTCGCCG GCCAGGTCTC CGCTGTGTAC
GTCGTCGCCC AGGCGCTCTG CTCTCCTCAG CTGGCCCGAC TGGTCGACAG GCACGGCCAG
GCGCGCGTCA TGCGGCCCGC GCTCGCGGTG TCGATGATCG GGCTCGTCGG GCTCATCCTG
GCCGCCACGT CCCACGCCGG AGCGCCGCTC CTGTTCGCGC TCGCGATCGT CACGGGCGCG
ACCATCGGCT CGCTCGGCTC GCTCGTCCGC ACCCGCTGGA ACGCCGTCGT CACCAACCCG
CGCGAGCTGC ACACGGCCTA CTCCCTCGAG TCGGCGCTCG ACGAGTTCGT CTTCGTCATC
GGCCCCGTGC TCGCGACCAT CCTCGCGACG AGCGTCTCGC CGTCGGCCGG GCTGGTCGTC
GCGATCGTCG CCGCACTCGT CGGCGGGTAC TGGTTCCTCA GCCTGCGCAA GACCGAGCCG
GCCCCGTCGC CCCCGGACGC AGGAACGCCG CGGACGTCGG TGCTGCGCGA CGGCGCGATC
GTCTCGATCT GCATCGTGTT CGTCTGCATC GGCGCGATCT TCGGCGCGAC GGACGTGTCG
GTGGTCGCGT TCGCCGAGGA GGAGGGCCAG AAGGGCCTGG CGGGCGTCAT CCTCGGGATC
TGCGCGAGTG GCTCGCTCAT CTCCGGCCTG CTGTACGGGG CGCGGCATTG GCGCTCGTCG
CTGTGGCGGC GGTTCGCGAT CGGCGTCGTC GCCCTCGCGC TCGGGGTCTC GCTGTTCTTC
CTCGTGACCT CGCTCTGGGT GCTGGCCGCT GTCATGTTCG TGGTCGGGTT CTCGATCGCG
CCGACTCTCG TCAACGGGAA CGCGCTCGTC CAGCAGATCG TGCCGCCCGC ACGCCTCACC
GAGGGCCTCA CGTGGATCGG CACGTCCCTG GGCGTCGGCG TCTCGTTCGG CTCGTCGATC
GCCGGCCCGA TCATCGACGC GAACGGTGCG CGCGCCGGGT TCCTCGTGGT CGTGGCGTCC
GCCGCCCTGG CGCTCGCCGC CATGGGGACG GCGCTCGCGA GCCGGAGGCG GCGGGACGCC
GTGGTCCCGA CGATCCCCGA CCCGGCCGCC GACCCGGCGT CCTGA
 
Protein sequence
MMRTVPNPYA QILRKPGALQ FSSAGVLARF PMSMVGIGIV LMISELYDSY GLAGQVSAVY 
VVAQALCSPQ LARLVDRHGQ ARVMRPALAV SMIGLVGLIL AATSHAGAPL LFALAIVTGA
TIGSLGSLVR TRWNAVVTNP RELHTAYSLE SALDEFVFVI GPVLATILAT SVSPSAGLVV
AIVAALVGGY WFLSLRKTEP APSPPDAGTP RTSVLRDGAI VSICIVFVCI GAIFGATDVS
VVAFAEEEGQ KGLAGVILGI CASGSLISGL LYGARHWRSS LWRRFAIGVV ALALGVSLFF
LVTSLWVLAA VMFVVGFSIA PTLVNGNALV QQIVPPARLT EGLTWIGTSL GVGVSFGSSI
AGPIIDANGA RAGFLVVVAS AALALAAMGT ALASRRRRDA VVPTIPDPAA DPAS