Gene Bcav_0347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0347 
Symbol 
ID7859039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp372129 
End bp374012 
Gene Length1884 bp 
Protein Length627 aa 
Translation table11 
GC content73% 
IMG OID643864423 
ProductHNH endonuclease 
Protein accessionYP_002880373 
Protein GI229818847 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA CCTTGAAAAC GCAGATGAGG TCGGTCACCG CGGCGGTGGG TGCGGGGTCG 
GGCGGGTGGC GCGAGGATGA GGCACTCGAC GTCGCCGCCG TGATCGAGGA CTTCGCGCGC
GCAGTCCGGC ACCTGCAGCT CGTCGCAGCA CACGCCGTGG CCGACGTCCA CGACCGTGGG
CGCGACCCCG GAGCAGGCGC TACTCGGCTC GGCGACGCGG ACGACGGCCA CCCCCTGTCG
TTCGGCAAGC GTGCACACCT CGGGCTCGTC GATGGCGACG GCGGCGCGAT GACAAACGGT
TCGCTCCGGT CGAACGGCGG GCTCACGTCG AGCGGTAGAA CGACTCGTGA CGACACGGCG
GCCACCGAGG ACACGTCGGA CGGCGGGCTC ATGGAACGAG GCAGCGCTGC GACGTCAGCA
GGACAGGGCG CCGCGGCCCC TCAGGCCGCC GCGGGAGCCA CCGCTGGTCG TCGGGGTCGG
GCCGCGCGGA ACCGGTCGCC CTATCGCAGT GCGGCGGACG CCCTGCGGGT GCGACTTCGG
CTGTCCGGCT ACGAAGCGCG GCGGCGGGTC GCCACGGCGC GGGACGTTCT CCCGGGCGTG
GCGATCTCCG GGGCAGAGCT CCCGGCGGCG TTTCCTCGAG TCGGTGCGCT GATCGCGGAC
GGCGAGGGCG ATCGGGACGC CGTCGGACAC ATCCTGCGCG GACTCCACCA GGTCGACGAG
GCTATCCGCC GCCGGCGCTC GATCGGCGTC ACGGTCGCGA ACCACGACGA GGACGGTGGC
GGTGGCGAGG AGGGCGTCGA CGGGGACGGC GGGGCGACCG CGAGCGAGCG CGCCCGAGCG
GAGGCGGTCG AGCAGCTCAC CGGTGCCGAG GAGATTCTCG TGACGGCGGC GCGGGAGGTC
GACGCCGACA GTGTCCGACG CCTGGCCGAG CGGATCGTCC ACCTGGTCGA CCAGGACGGC
CCGGAGCCGA TGGTTCCGGA CCTCGCCGCC GCTGGCGTGT GGGAGATGGG ACGCCGTCAC
GGACTGCACC ACCTCCGCGT CCTGGTCGAC GACGTCGGGC GGGAGCTTCT CGACACCGTG
TTCGCCACAG CGACCAACCC GCGCACGTTC GAGGACACCA CCTGCGAGAA CGCCCGCACC
GACACCGATA CCGGATCCAC TGCTGCCGAC GAGCCCCAGA GCGGAACGGC GGGCACCGGC
ACGCGCCCGG GCGGCGACTC ACCCAACGCC GCCGCGGGCT CCGACGCGGG CATGACCGCC
ACGGCCGCAA CGACCGCTGC TCCCCCCGAA CGCCGCTCCG TCGCCAGGCT ACGGCTGGAC
GCCCTGCTCG CGGCGTGCGG TGCCGCACTT CGCGTGCGGG CGCTGCCCAA GACCGGGGGT
CTGCCCACGC AGGTCATGGT CACCGTCTCG CTTGATGAGC TACGGAGCGG GCTCGGCTCC
GCCCACCTTC CGTACACCGG CCCGATCCGG GCCCGTGACG TCCGCCAGTT GGCCTGCGAC
GCCGACATCA TCCCGATCGT GCTCGGCACA CGCGGGCAGG TCCTCGACGT CGGACGCGCG
CACCGCCTCT TTCCGCCCCA CCAGCGCCGG GCACTGATCG CCCGAGACGG CGGCTGCGCC
TACCCCGGCT GCCACATCCC AGCCCCGTGG TGCGAAGGCC ACCACGTCGT GGAGTGGTGG
CGCGGAGGCG GCACGAGCAT CAACGACGGC GTGCTGCTCT GCGCGTACCA CCATCACCTC
ATCCACGCCG GGCGCAGCCG CGTGACAACC GCGTCCGGAG TCCCGCAGTT CCACGAGCCG
AATTCCAGTC CGAGCCGCGG GGCCGGGCGT CGCCCGGTGC GCAACACCTA CCACCGTCCG
CCCCTGCCGC CACGACGCCA GTAG
 
Protein sequence
MTATLKTQMR SVTAAVGAGS GGWREDEALD VAAVIEDFAR AVRHLQLVAA HAVADVHDRG 
RDPGAGATRL GDADDGHPLS FGKRAHLGLV DGDGGAMTNG SLRSNGGLTS SGRTTRDDTA
ATEDTSDGGL MERGSAATSA GQGAAAPQAA AGATAGRRGR AARNRSPYRS AADALRVRLR
LSGYEARRRV ATARDVLPGV AISGAELPAA FPRVGALIAD GEGDRDAVGH ILRGLHQVDE
AIRRRRSIGV TVANHDEDGG GGEEGVDGDG GATASERARA EAVEQLTGAE EILVTAAREV
DADSVRRLAE RIVHLVDQDG PEPMVPDLAA AGVWEMGRRH GLHHLRVLVD DVGRELLDTV
FATATNPRTF EDTTCENART DTDTGSTAAD EPQSGTAGTG TRPGGDSPNA AAGSDAGMTA
TAATTAAPPE RRSVARLRLD ALLAACGAAL RVRALPKTGG LPTQVMVTVS LDELRSGLGS
AHLPYTGPIR ARDVRQLACD ADIIPIVLGT RGQVLDVGRA HRLFPPHQRR ALIARDGGCA
YPGCHIPAPW CEGHHVVEWW RGGGTSINDG VLLCAYHHHL IHAGRSRVTT ASGVPQFHEP
NSSPSRGAGR RPVRNTYHRP PLPPRRQ