| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0339 |
|---|
| Symbol | |
|---|
| ID | 7859031 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 362850 |
|---|
| End bp | 364589 |
|---|
| Gene Length | 1740 bp |
|---|
| Protein Length | 579 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643864415 |
|---|
| Product | PAS/PAC sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_002880365 |
|---|
| Protein GI | 229818839 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5002] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACAGCG CTGCCACCCG GACCGCGGAG AGCGTCCGGC TTCCGGCGAT CATCTCCCGC
TGGTTCGAGC CGACGGCGGT GGGGCTGCGG CAGGTGCCGC TGACGGTGAG CTACGCCCTG
GTGCTCGCTT CGATCACCGT CACGCACGAG GTCGGCCACA CGGTGCTGCT CGTGGTGGGC
GCACTGATCG TGCTCGCGGT CCAGCTCATC GGCAGCCTCG GGCGCTGGAC GCAGTGGTCG
CCGTGGCAGT ACGCGCTGCC GCTCGCCCAG ATGGTCGCGC TCGTGCTGCT CGAGCTGGGC
GCCGGCGTGG AGCGCAGCTA CTTCCTCAGC CTCGTGTTCA TACCCGTGGC CAGCCTCGCG
CTCCAACCGG GCCTGCTCGG CACCGTCCTC GCGATCGCCG GCGCGACCGC CGTCATCACC
CTCGGAGTGA CGACGAACCC GGACATCGAA GGCACCCCGC CCGCGATCCG GGTCTTCGTG
GTCGGGATCG TCGCCGCGTT CGTCGCGATC GGCACGCACG GGGCGACTGA CGCCCTGCGA
CGGCAGGCCG ACGACCTGAC ATCGGCGCGC GACGAGCTGA CGGCGCGCGC GAAACAGCTC
GTCTCCTCGC GCGACCTGCT GCGCAGCGTC ATGGCCGCCG CGACGGAGCA GGCGGTCGTC
GCCACCGACG CCGACGGGAC AGTGGTCGCC GTGAGCACCG GGGCGGAGCG GATGTTCGAG
CGTCCGCAGG ACGAGCTCCT CGGCACGTGC GTCGCTGATC TCTTCCCGCC GGGCGCGGCG
GATCCGGGGG GGCCGGCGCC GGCGCGCCCG TGGGCGCGCG TGGCCGCCCT CGTCGCGGCG
GCGACGGCAG ACGGTGCGAC GTCAGCGGAG CGCACCCTCA CCCGGCGCGA CGGATCGGCG
CGGGCGCTGG AGGTCGTGGT GACGCGCCGA CCTCCGTTGT CGGACGAGCT CCCGGCGCCC
GCGCCCGGGT ACCTGTTCGT CGCGACGGAC GTCACCGCAC GGCATGAGGC GGAGCGCCTG
CAGGACGAGT TCATCGGCCT CGTGAGCCAC GAGCTGAGGA CCCCGCTCTC CTCGATCCTC
GGCTACGTCG AGCTGCTGCA GCTCGGTGGC GCCTTGAGCG GAGAGGACGA GACGTACGTC
GACGTCATCG ACCGCAACGC GCGTCGCCTC CTGCGGATGG TCGACGACCT GCTCACGAGC
GTGCAGCTCA CGGCGGGAAC GTTCACCTTC CTCCCCGAGC AGGTCGACGT CGTCGGCGTG
GTCCGCGAGC TCGTCACGGA CATCGAGCCG ACGGCGCGGC GCGCCGAGGT CCAGGTGGTC
GTGGCGGGCG ACGACGCCGT CCCGCTGCGC TCCGATCCTG GGCGCCTGGG GCAGGTGGTC
GGGAACGTCC TGGGCAACGC CGTGAAGTTC AGCGCGCGTG GAGCCACAGT GACGGTGAAG
GTCACCGGTC TGCTCGGTGC CGACGGCCGG CGCCGCGCGC GGATCGTCGT GACCGACACG
GGCAGCGGGA TCGCCCCGGA CGATCTCGCG CGGATCACCG AACGCTTCTA CCGCTCGAGC
GACGCCCGCC GACGTCGCGT GCGCGGCGTC GGCATCGGGC TGTCGGTCGT GCAGGCGATC
GTGGACGCGC ACGGCGGCAC GATCACGATC CGGTCGCAGC CGGGAGAGGG CACAGTCGTC
GAGATCGACC TGCCGGACCT GACCGGCCGA CCCGCCCCCG CGGCGTCGCC AGCCGAGTGA
|
|---|
| Protein sequence | MNSAATRTAE SVRLPAIISR WFEPTAVGLR QVPLTVSYAL VLASITVTHE VGHTVLLVVG
ALIVLAVQLI GSLGRWTQWS PWQYALPLAQ MVALVLLELG AGVERSYFLS LVFIPVASLA
LQPGLLGTVL AIAGATAVIT LGVTTNPDIE GTPPAIRVFV VGIVAAFVAI GTHGATDALR
RQADDLTSAR DELTARAKQL VSSRDLLRSV MAAATEQAVV ATDADGTVVA VSTGAERMFE
RPQDELLGTC VADLFPPGAA DPGGPAPARP WARVAALVAA ATADGATSAE RTLTRRDGSA
RALEVVVTRR PPLSDELPAP APGYLFVATD VTARHEAERL QDEFIGLVSH ELRTPLSSIL
GYVELLQLGG ALSGEDETYV DVIDRNARRL LRMVDDLLTS VQLTAGTFTF LPEQVDVVGV
VRELVTDIEP TARRAEVQVV VAGDDAVPLR SDPGRLGQVV GNVLGNAVKF SARGATVTVK
VTGLLGADGR RRARIVVTDT GSGIAPDDLA RITERFYRSS DARRRRVRGV GIGLSVVQAI
VDAHGGTITI RSQPGEGTVV EIDLPDLTGR PAPAASPAE
|
|---|
| |