| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0315 |
|---|
| Symbol | |
|---|
| ID | 7859007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 339203 |
|---|
| End bp | 339709 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643864391 |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_002880341 |
|---|
| Protein GI | 229818815 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGGG GTGAGGCGGT GAGCGAGGTC CTGGTGCGCG ACGAGGCGGT GACGGCGCTG
CGCCGCGCGC GCGACCTCGC GGACTCGCGG TATGCGGACG AGATCGACGT CGACACGCTT
GCGGCGTCGG CGGGGTACTC GCGGTACCAC TTCTCCCGGC TCTTCCGGCG CGTCTACGGC
GAGACGCCGG GCCAGTACCT CTCGCGCCGG CGGGTGGAGC GGGCGCAGCA GATCCTCTCG
TCGACCAACC TCACGGTGAC CGAGGTGTGC CATCTCGTCG GGTTCACGAG CCTGGGCTCC
TTCAGCAGCC GCTTCCGCGC GCTCGTCGGC GTGGGTCCGC AGGAGTACCA GCGTCGGAAG
GTCGCGGAGG GCGTCCCGCC GATCCCCGGG TGCTTCCTGC TCCTCGCCGC CGGTCTCCCG
ACGGCGGATC GGACGACGGC GGATCGGACG ACGGCGGACC GCATCACCGC ACGTGTGGAG
AAGCAGACGG GCCAGGGTGC GCCGTAG
|
|---|
| Protein sequence | MARGEAVSEV LVRDEAVTAL RRARDLADSR YADEIDVDTL AASAGYSRYH FSRLFRRVYG
ETPGQYLSRR RVERAQQILS STNLTVTEVC HLVGFTSLGS FSSRFRALVG VGPQEYQRRK
VAEGVPPIPG CFLLLAAGLP TADRTTADRT TADRITARVE KQTGQGAP
|
|---|
| |