Gene Bcav_0265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0265 
Symbol 
ID7860059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp286679 
End bp287602 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content72% 
IMG OID643864342 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002880292 
Protein GI229818766 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0805206 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGACG TGTCCGATCT GGCGGAGCTG CACGACGACC TGCGCCCGTT GATGTTCTCG 
ATCGCCTACC GGATGCTCGG CAGCGTCGCG GAGGCGGAGG ACGTGGTGCA GGAGGCGTTC
CTCCGCATGC ACCGTGGCGC GCCGGACGGA CTCGACGTCG ACAACCCGGA GGCGTACGCG
ACCACCGTCA CGACGCGGCT GGCGATCGAC ACGCTGCGTT CGGCCCGGGT CCGGCGGGAA
CGGTACGTCG GCCCGTGGCT GCCTGAGCCG CTCCTCCCGT CCGAGGACGC CGACCCCGCG
CACCGGATCG AGCTGGACGA GACCGTGTCC ACGGCGTTCC TCGTGCTGCT GGAGGCGCTG
ACCCCGGTGG AGCGCGCCGT GTTCGTGCTG CGCGAGGTGC TGGGCTACGA CTACGCGGAC
GTCGCCGCCA TCGTCGAGAA GAACGAGTCG AACTGCCGGC AGATCCTCGT CCGGGCGAGG
AAGCGGATCG ACGCCGGCCG CCCACGGTTC GACGCCGACC GGGAGCACCG GGACCGGCTG
GCGGCGCAGT TCATCGCCGC CGTCACCGAC GGCGACCTGG CCGGGCTGGA GCGGCTGCTC
GCCGCCGACG TCGTGTTCGT CGGCGACGGC GGCGGCCGGG CCCCGGCCAT CCAGCGTCCG
CTGATCGGCA TGGCCGGGGT GGTCCGCTTC CTCGGCGGCA TGATCCGCCA GGGCGAGCGG
TTCGGCGCGG TGATCGAGGC GGGCGAGGCC AACGGCCAGC TCGCGATGGT CGTCCGCACC
GCCCAGGGCG ACCTGCTCAG CGTCATGACG ATCGACGTCG CGGACGGCCA GGTCGTCGCG
CTGCGCAACC AGCTCAACCC CGACAAGCTC CAGCACGTCG GCCAGGTCGG CGACATGTTC
GCCTTCCTCC GCGGCGAGGC GTAG
 
Protein sequence
MRDVSDLAEL HDDLRPLMFS IAYRMLGSVA EAEDVVQEAF LRMHRGAPDG LDVDNPEAYA 
TTVTTRLAID TLRSARVRRE RYVGPWLPEP LLPSEDADPA HRIELDETVS TAFLVLLEAL
TPVERAVFVL REVLGYDYAD VAAIVEKNES NCRQILVRAR KRIDAGRPRF DADREHRDRL
AAQFIAAVTD GDLAGLERLL AADVVFVGDG GGRAPAIQRP LIGMAGVVRF LGGMIRQGER
FGAVIEAGEA NGQLAMVVRT AQGDLLSVMT IDVADGQVVA LRNQLNPDKL QHVGQVGDMF
AFLRGEA