| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0256 |
|---|
| Symbol | |
|---|
| ID | 7860050 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 279638 |
|---|
| End bp | 280357 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643864333 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002880283 |
|---|
| Protein GI | 229818757 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.122805 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGACC TCCCACTCCA GGTGCGCGAC CTCGTGCGCA CGTTCCCGGG CGGGGCTGGG
CTCCACGGGA TCGATCTCGA CGTCGCACCG GGGTCCGTAC ATGCCCTCGT CGGCCTGAAC
GGAGCCGGGA AGACGACGCT CATGAAGGCC GTCCTCGGCA TGCTGCGCCC GACATCGGGA
ACGGTCCGGG TCTTCGGCGC CGACGCGGCG GCGGCCCGGT GGGACGCCGT CGGGCATGTT
GTGGCGGGCG CCGCGACGTA CGCCGAGCTC ACCCTCCGCT CGAACCTGCT CGCGGCAGCG
CGGTGGCACG GCCTGGCCGG CGCCCGCGCG GGGGACGCCG TCGACCGGCT GCTCGACGAG
CTGGACCTCG CCCGGTACGC GCGGGTGCGC ACGAGCCGGC TCTCCGACGG GAACAGGCAA
CGACTCGCTC TCGCCGGGGC GCTCGTGCAC GACCCCGCCC TCGTGGTGCT CGACGAGCCG
ACGAACACGC TCGACCCGTC CGGCGTCGTC CTCCTGCGCG AGACGCTCCT GCGCCGGGTG
GCGGTCGGCG CGGCCGTGCT CGTCTCGAGC CATCACCTCG ACGAGGTGGC GCGGATCGCC
GACAGGATCA CGGTCATCAA CCGCGGACGC GTCGTCGGCG CGCTCGACCC GCGCGGTCTC
GACATCGAGC GGGAGTTCTT CGCCATCGTG CACGACGACG ACCAGCGAGC CTCGCGATGA
|
|---|
| Protein sequence | MADLPLQVRD LVRTFPGGAG LHGIDLDVAP GSVHALVGLN GAGKTTLMKA VLGMLRPTSG
TVRVFGADAA AARWDAVGHV VAGAATYAEL TLRSNLLAAA RWHGLAGARA GDAVDRLLDE
LDLARYARVR TSRLSDGNRQ RLALAGALVH DPALVVLDEP TNTLDPSGVV LLRETLLRRV
AVGAAVLVSS HHLDEVARIA DRITVINRGR VVGALDPRGL DIEREFFAIV HDDDQRASR
|
|---|
| |