Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0245 |
Symbol | |
ID | 7860039 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 266978 |
End bp | 267481 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643864322 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002880272 |
Protein GI | 229818746 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGACG AGGCGTTGCT CATGCGTGCG CTGCACGACG CGCACGCACC GGCGCTGCGC CGGTACGTCG TCGCGCTCGG GGTCGAGGGG GGCGGAGTCG ACGACGTGGT CCAGGAGACG CTCGTGCGTG CCTGGCGCAA GCCCGAGGTG CTCGACGAGA CCCAGCGGTC CGCGCGGGCG TGGCTGTTCA CCGTCGCCCG GCACCTCGTC ATCGACGAGC ACCGCACGGC ACGTCGGCGG CACGAGCGAC CGGCCTGGGA CCCGCCGGAC GTCGCCGTCG ACGACGAGAG CGACCACCTG CTCGACCAGT GGCTCGTCGC CGACGCCCTG GCGGCGCTGA CGCCGGAGCA CCGGTCCGTC GTCGTCCGGG CGTACTACGG CGGATGGTCG GTGGCGCAGA TCGCGTCCGC CGCCGGGATT CCCGCCGGCA CGGTGAAGTC ACGGCTGCAC TACGGCCTCC GCGCGCTCCG GCTCGCGCTC CAGGAGAAGG GGGTGACCCG ATGA
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Protein sequence | MDDEALLMRA LHDAHAPALR RYVVALGVEG GGVDDVVQET LVRAWRKPEV LDETQRSARA WLFTVARHLV IDEHRTARRR HERPAWDPPD VAVDDESDHL LDQWLVADAL AALTPEHRSV VVRAYYGGWS VAQIASAAGI PAGTVKSRLH YGLRALRLAL QEKGVTR
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