Gene Bcav_0245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0245 
Symbol 
ID7860039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp266978 
End bp267481 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content74% 
IMG OID643864322 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002880272 
Protein GI229818746 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGACG AGGCGTTGCT CATGCGTGCG CTGCACGACG CGCACGCACC GGCGCTGCGC 
CGGTACGTCG TCGCGCTCGG GGTCGAGGGG GGCGGAGTCG ACGACGTGGT CCAGGAGACG
CTCGTGCGTG CCTGGCGCAA GCCCGAGGTG CTCGACGAGA CCCAGCGGTC CGCGCGGGCG
TGGCTGTTCA CCGTCGCCCG GCACCTCGTC ATCGACGAGC ACCGCACGGC ACGTCGGCGG
CACGAGCGAC CGGCCTGGGA CCCGCCGGAC GTCGCCGTCG ACGACGAGAG CGACCACCTG
CTCGACCAGT GGCTCGTCGC CGACGCCCTG GCGGCGCTGA CGCCGGAGCA CCGGTCCGTC
GTCGTCCGGG CGTACTACGG CGGATGGTCG GTGGCGCAGA TCGCGTCCGC CGCCGGGATT
CCCGCCGGCA CGGTGAAGTC ACGGCTGCAC TACGGCCTCC GCGCGCTCCG GCTCGCGCTC
CAGGAGAAGG GGGTGACCCG ATGA
 
Protein sequence
MDDEALLMRA LHDAHAPALR RYVVALGVEG GGVDDVVQET LVRAWRKPEV LDETQRSARA 
WLFTVARHLV IDEHRTARRR HERPAWDPPD VAVDDESDHL LDQWLVADAL AALTPEHRSV
VVRAYYGGWS VAQIASAAGI PAGTVKSRLH YGLRALRLAL QEKGVTR