Gene Bcav_0208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0208 
Symbol 
ID7860002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp222971 
End bp223939 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content72% 
IMG OID643864285 
Productdeoxyribose-phosphate aldolase 
Protein accessionYP_002880235 
Protein GI229818709 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0274] Deoxyribose-phosphate aldolase 
TIGRFAM ID[TIGR00126] deoxyribose-phosphate aldolase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0139396 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCGACG CGCTCGACGA GGCGCGCATC CGCGAGATCG CCGCGTCGCC GGCGTCCCTG 
CGCCAGTTCC TCCACGGCCT GCCTGGTGTC GACCAGGTGG GCGCCGAAGC GCGCGCCGCC
ACGCTCGGCA CGCGCTCGAT CAAGACGACG GCGAAGGCCG AGGCGATCGA CCTCGCCATC
CGGATGATCG ACCTCACCAC GCTCGAGGGG CAGGACACCC CGGGCAAGGT CCGCGCCCTG
TGCGCCAAGG CCAGGCGCCC GGACCCGTCC GACGCCTCGG TGCCCCAGGT GGCGGCGATC
TGCGTGTACC CCGACCTGGT CACCGTGGCC CGGGACGCGC TCGCGGGCAG CGGGATCCAC
GTGGCGAGCG TCGCCACGGG CTTCCCCTCG GGCCGCACGA GCCTCGCCGT CAAACTTGCC
GACACGCGTG ACGCCGTCGA CGCCGGTGCC GACGAGGTCG ACATGGTGAT CGACCGCGGC
GCGTTCCTCA CGGGCCGCTA CACCGACGTG CTCGCCGAGA TCGTCGCCGT GCGGGAGGCG
TGCGTGCGCT CCGACGGCAC CCGCGCCCAC CTCAAGGTCA TCCTCGAGAC CGGCGAGCTG
GCGACGTACG ACAACGTCCG CCGGGCGTCG TGGCTGGCGA TGCTCGCGGG CGCGGACTTC
ATCAAAACGT CGACCGGGAA GGTGTCGCCG GCCGCGACGC CGCCCGTCAC GATGATCATG
CTCGAGGCGG TGCGCGACTT CCGGGACGCC ACCGGCCGGC AGGTCGGCGT CAAGCCCGCC
GGCGGGATCC GCACCACGAA GGACGCGATC AAGAACATCG TGCTCGTCAA CGAGGTCGCG
GGCGAGGACT GGCTGTCGCC CGAGTGGTTC CGCCTGGGTG CCTCGAGCCT GCTCAACGAC
CTGCTCATGC AGCGCCAGAA GCTCCGCACC GGCCGCTACG CGGGCGCCGA CTACTTCACG
CTCGACTGA
 
Protein sequence
MLDALDEARI REIAASPASL RQFLHGLPGV DQVGAEARAA TLGTRSIKTT AKAEAIDLAI 
RMIDLTTLEG QDTPGKVRAL CAKARRPDPS DASVPQVAAI CVYPDLVTVA RDALAGSGIH
VASVATGFPS GRTSLAVKLA DTRDAVDAGA DEVDMVIDRG AFLTGRYTDV LAEIVAVREA
CVRSDGTRAH LKVILETGEL ATYDNVRRAS WLAMLAGADF IKTSTGKVSP AATPPVTMIM
LEAVRDFRDA TGRQVGVKPA GGIRTTKDAI KNIVLVNEVA GEDWLSPEWF RLGASSLLND
LLMQRQKLRT GRYAGADYFT LD