Gene Bcav_0195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0195 
Symbol 
ID7862067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp209274 
End bp210800 
Gene Length1527 bp 
Protein Length508 aa 
Translation table11 
GC content72% 
IMG OID643864272 
ProductAlpha-N-arabinofuranosidase 
Protein accessionYP_002880222 
Protein GI229818696 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3534] Alpha-L-arabinofuranosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCACGG CCCGTATCAC GGTCGATCGG GATTTCACCG TCGGTCTGGT ACCGCGGCGC 
TTGTTCGGGA GCTTCGTGGA GCACATGGGG CGGTGTGTGT ACTCGGGGAT CTATGAGCCG
GGGCACCCGA CCGCGACGCC GGAGGGGTTC CGGCAGGACG TGCTGGACCT GACCAGGGAG
CTGGGGGTCA CGGTGGTGCG CTACCCGGGT GGGAACTTCG TGTCCGGGTA TGACTGGGAG
GACGGCGTCG GGCCTGTCGA TCAGCGGCCG CGGCGGCTGG ACGCGGCGTG GCACTCGGTG
GAGACGAACG CGTTCGGGCT GCACGAGTTC GTCGCGTGGG CGGGGACGGC GGACGTGGAG
GTGATGGAGG CGGTGAACCT CGGCACGCGC GGCGTGGACG AGGCGCGGCG CCTCGTGGAG
TACGCGAACC ATCCGGGTGG CACGGCGCTG TCGGACCTGC GCCGTGCGAA CGGGGCGGAG
GAGCCGTTCG GCATATCGCT GTGGTGTCTG GGGAACGAGA TGGACGGGCC GTGGCAGATC
GGGCACAAGA CGGCGGAGGA GTACGGGCAC CTCGCGGTGG AGACGGCGAA GGCGATGCGG
TGGGTGGATC CCGGGCTGGA GCTCGTCGCG GTCGGCAGCT CCGGGCGCGG GATGCCGACG
TTCGGCGACT GGGAGCGGGT CGTGCTGCGC CACGCCTACT CGGAGGTCGA CTACATCTCG
CTGCACGCGT ACTACGGCGA GAGCGACGGT GACGCGGCGA GCTATCTCGC CTCCGGGGTC
GACATGGACC GGTTCATCGA CGGCGTGGTC GCGACGGTCG ACGCGGAGCG CGCCCGGGGC
AAGCACCGCA AGGTCGTCAA CCTCTCGTTC GACGAGTGGA ACGTGCTCCA CCCGCCCGCC
GGCGACGACG CTCCGGCCGA CGTTCCGGCC GACTGGCCCG AGCACCCACC GATCGCCGAG
CACACATACG ACGTGACGGA CGCCGTCGTC GTCGGCACCC TGCTGCATTC CCTGTTGCGC
CACGGCGACC GCGTGACCGT CGCGAACCAG GCCATCCTCG TGAACGTCCT GGGCCCCATC
CGGAGCGAGG AAGGTGGCCC GGCGTGGCGG CAGGCGACCT TCTGGCCGTT CGCCCGGACC
GCGGCCCTGG CACGCGGGGC GATCCTGCGC ACGGCGGTGA CGAGCGAGCG CGCGGAGACG
GAGAAGCACG GCGAGGTCGA CGTCGTCGAC GCCGCCGCCA CCTGGGACGC CGAACGCGGG
CGGGTGGCCC TGTTCCTCGC CAATCGGGAT CTGGCCGCCG ATGCTGCCGT CGAGCTCGTG
CTGCGCGGTC TGGACGTGAC GCGTGTCGTG AGCGCCGAGG TGCTGGCCGG CCCGGACGGC
GACCGGACCG TGACGAACGA CGTCGAGAAC CCGGAGCGGG TCGGCCTGCG GCCGCTCGAC
GGCGTCCTCG CCGACGGGGA CGCCGTCCGC GTGAGGCTGC CGCCCGTGTC CTGGGCCGTC
GTCGAGCTCG AGGTCACGAC CGCCTGA
 
Protein sequence
MVTARITVDR DFTVGLVPRR LFGSFVEHMG RCVYSGIYEP GHPTATPEGF RQDVLDLTRE 
LGVTVVRYPG GNFVSGYDWE DGVGPVDQRP RRLDAAWHSV ETNAFGLHEF VAWAGTADVE
VMEAVNLGTR GVDEARRLVE YANHPGGTAL SDLRRANGAE EPFGISLWCL GNEMDGPWQI
GHKTAEEYGH LAVETAKAMR WVDPGLELVA VGSSGRGMPT FGDWERVVLR HAYSEVDYIS
LHAYYGESDG DAASYLASGV DMDRFIDGVV ATVDAERARG KHRKVVNLSF DEWNVLHPPA
GDDAPADVPA DWPEHPPIAE HTYDVTDAVV VGTLLHSLLR HGDRVTVANQ AILVNVLGPI
RSEEGGPAWR QATFWPFART AALARGAILR TAVTSERAET EKHGEVDVVD AAATWDAERG
RVALFLANRD LAADAAVELV LRGLDVTRVV SAEVLAGPDG DRTVTNDVEN PERVGLRPLD
GVLADGDAVR VRLPPVSWAV VELEVTTA