Gene Bcav_0193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0193 
Symbol 
ID7862065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp206447 
End bp207469 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content73% 
IMG OID643864270 
Producttranscriptional regulator, LacI family 
Protein accessionYP_002880220 
Protein GI229818694 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGATC GGTCGACGAG ACGGAAGAAG CCCTCTCTTG CCGAGGTCGC GGAGATCGCC 
GGGGTCTCGA TCTCGACCGT GTCGAAGGTC GCGAACGGCA GCGTCGACGT CTCCGACGTG
ACGCGCGAGC GGGTCGAGCG GATCCTGTCC GAGCGCGGGT ACGTCGCCAC GAAGAAGCGC
CGCGGCTCGC TCATGCCCGT GGCGATCCTG GCCCGCGACA TGCACTCGCC GTACACGCTC
GACGTCATCC GGGGCGCCGT CGACGCCGCC GGGCCGGTGC AGGTCGACGT CACCGTCGCG
CGGCATCCGG ACGACGCCGC CGACCTGCGC TGGATCGACG AGATCCACGC CGCGGGGCGT
CGGGGCATCA TCGCGATCAC GTCGATGCTC GACGAGGCCC AGCGCGCCCG CGTCGCCCAC
CACGGGCTCG CGCTCGTGGT CATCGACGCC GTGAACAACC CCGACGAGGC GACGTTCAGC
GTGGGCGCCA CGAACTGGGC GGGCGGCCTC GGGGCGACCG AGCACCTGCT CGACCTGGGT
CATCGCGACG TGGCGATGCT CTCGGGCCTG CCGCAGACCA TGGCCAGCCG GGCCCGGGTC
TCCGGGTACC GCGCGGCGCT CAACGGGTTC GAGGGCGACC ACGCGCCCGC CCGCGTGCTC
CCCGGCGACT TCACGTACGA CTCGGGACTC GAGCTCGGGG CGCAGCTGCT GGCCGGGAAA
GCGCGGCCGA CGGCGATCTT CGCGGCCTCG GACTTCCAGG CGCTCGGCGT GCTGGAGGCC
GCGCGGCGTG CGGGGCTGCG CGTGCCCGAG GACCTCAGCG TCGTGGGGTT CGACGACCTG
ATCATGGCGC AGATGTCCTC GCCGCAGCTC ACGTCGGTCC GGCAGCCGCT GGAGCAGATG
GGCGCGACAG CGGTCGAGAC GATCGTGGCG CTGCTCGGGG GTGCGACCGG CCGACCGCAC
CACACCGAGC TCGCGACGCG CCTCGTCGTG CGCGGCTCCA CGGCGCCTCC GCCGGAGCGG
TGA
 
Protein sequence
MADRSTRRKK PSLAEVAEIA GVSISTVSKV ANGSVDVSDV TRERVERILS ERGYVATKKR 
RGSLMPVAIL ARDMHSPYTL DVIRGAVDAA GPVQVDVTVA RHPDDAADLR WIDEIHAAGR
RGIIAITSML DEAQRARVAH HGLALVVIDA VNNPDEATFS VGATNWAGGL GATEHLLDLG
HRDVAMLSGL PQTMASRARV SGYRAALNGF EGDHAPARVL PGDFTYDSGL ELGAQLLAGK
ARPTAIFAAS DFQALGVLEA ARRAGLRVPE DLSVVGFDDL IMAQMSSPQL TSVRQPLEQM
GATAVETIVA LLGGATGRPH HTELATRLVV RGSTAPPPER