Gene Bcav_0160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0160 
Symbol 
ID7859325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp167397 
End bp168359 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content74% 
IMG OID643864237 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_002880187 
Protein GI229818661 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGC TCACCGTGAC CGAGGCGCAC GTCGAGTACC GCTCCCGCGG GCGCGGGCTC 
GTGCGCGCCG TCGACGGCGT CTCGCTCACC GTGCAGGCCG GGCAGATCGT CGGGCTGGTC
GGCGAGTCGG GATGCGGCAA GTCGTCGCTG GCGCGCGCCG TCGTCGGCAT GGAGCCGGTC
ACGTCCGGGG AGATCGCGCT CGACGGGCGG CCGGTCCCCC CGCTGGGCTG GCGCCGGCGG
TCCGGGCCGG ACCTGCGGCT GCAGATGGTG TTCCAGAACC CCTACGCGTC GCTCAACCCC
CGCCGGTCGG TCGGCGACCA GATCACGGAC GGTCTCGCCG TGCCCCGTGA GGAGCAGGGG
CGCGAGGTGG CCCGGCTCCT CGAGCTCGTC GGGCTCGAGC CGGAGGCCGC GGACCGCTAC
CCGCACCAGT TCTCCGGCGG GCAGCGGCAG CGGGTGGCCA TCGCGCGGGC GCTGGCCGCC
CGGCCGGACG TGCTCGTGGC CGACGAGCCC GTGACCGCGC TCGACGCCTC CTCGCAGGCG
CAGATCGTCA ACCTGCTCAC CTCGCTCGTC GACGACCTCG GCCTCGGGAT GCTCTTCATC
TCCCACGACC TGGCCCTGGT CCGCGAGATC GCCGACGTCA CAGCGGTCAT GTACCTCGGC
CGGATCGTGG AGCACGGGCC CACCGAGCAG GTGTGGTCGC AGCCCCGGCA CCCGTACACG
CGGACGCTGA TCGAGGCGCT CCCGCGCATC TCGGCCGACG CCCACCTGCC CGTCGGCCTG
CGGGGGGAGG TGCCCGACGG CGCGCACGTG CCCACGGGGT GCCGCTTCCG CACGCGGTGC
CCGGCCGTCA TGCCGATCTG TACGACCGAA CCACCGGTGG TGGTGGACGG CGAGCACACT
GTCGCGTGCT GGCTCGCCGA CGAGAGCACG CTGCGCGCGA GCGCCACGGA GGGAGCACGA
TGA
 
Protein sequence
MSALTVTEAH VEYRSRGRGL VRAVDGVSLT VQAGQIVGLV GESGCGKSSL ARAVVGMEPV 
TSGEIALDGR PVPPLGWRRR SGPDLRLQMV FQNPYASLNP RRSVGDQITD GLAVPREEQG
REVARLLELV GLEPEAADRY PHQFSGGQRQ RVAIARALAA RPDVLVADEP VTALDASSQA
QIVNLLTSLV DDLGLGMLFI SHDLALVREI ADVTAVMYLG RIVEHGPTEQ VWSQPRHPYT
RTLIEALPRI SADAHLPVGL RGEVPDGAHV PTGCRFRTRC PAVMPICTTE PPVVVDGEHT
VACWLADEST LRASATEGAR