Gene Bcav_0125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0125 
Symbol 
ID7859290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp130636 
End bp131496 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content74% 
IMG OID643864202 
ProductSMP-30/Gluconolaconase/LRE domain protein 
Protein accessionYP_002880152 
Protein GI229818626 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3386] Gluconolactonase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACATCG ACGCGATCGC CGCCACAGCT GACGAGCTCG GCGAGTCGGC GCTCTGGGAC 
GCTGCGGAGG GTGCGCTCTA CTGGCTGGAT CTCGCGCGTC CGACGCTGCA CCGCTGGGAC
GGGAGCGGCG ACGTCCGGTC GTCCCCCGTG CCGCTGCCGG CTCCGCTCGG TGCCCTCCTG
CCGACCAGCT CCAGGGAGGA CCTCCTGCTC GCCGCCGGCC GCCGCCTGTA CCGGATCTCC
CGCACGAGCG CTGCCGTCGC ACCGCTCGAA CCTGAGCTGG GCCTCACGCC CGGGACCCAC
GTCAACGACG CGAAGACCGA TGCCACCGGC GCCATCTGGC TGAGCACGGC CGACGTCGCC
GAGCGCGCGC CGGTGGGCGG GCTCGTGCGG GCATCGGACG GTACGGGGGC GCCCGAGCGC
TTTGTCGTGA CGAACGGACC GGCGTTCAGC CAGGACGGGA GCGAGGTGTA CGTCAGCGAC
TCCGTCGGCG GGCGCGTGCT CGCCTACGGT CTGCGCGAGG GGATGCTCGG TGAGGGCCGG
CTCGTCGTGC AGTTCAGCGA GGACGACGGG TTGCCGGACG GGCTGGCCGT CGACGCCGAG
CACGGGATCT GGGTCGCCCA CTGGGACGCC GGGTGCCTCA GCCGCCACGA CCCGTCGGGC
ACGCTGACGG CCCGCGTCGA CCTGCCGGCG CGCCACGTGA CGAGCCTGGC GTTCGGCGGG
CCGGACCTGG AGGACCTCTT CGTGACCACG GCGCGCTACG AGCTCAGCCC TGCCGAGATC
GCCGCGCACC CGGGGTCCGG CTCCGTCTTC CGGCTCCGGC CCGGCGTGCG CGGGGTGCCG
GCCGAACCGG CCAGCCTGTA A
 
Protein sequence
MNIDAIAATA DELGESALWD AAEGALYWLD LARPTLHRWD GSGDVRSSPV PLPAPLGALL 
PTSSREDLLL AAGRRLYRIS RTSAAVAPLE PELGLTPGTH VNDAKTDATG AIWLSTADVA
ERAPVGGLVR ASDGTGAPER FVVTNGPAFS QDGSEVYVSD SVGGRVLAYG LREGMLGEGR
LVVQFSEDDG LPDGLAVDAE HGIWVAHWDA GCLSRHDPSG TLTARVDLPA RHVTSLAFGG
PDLEDLFVTT ARYELSPAEI AAHPGSGSVF RLRPGVRGVP AEPASL