Gene Bcav_0116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0116 
Symbol 
ID7859281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp123589 
End bp124008 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content72% 
IMG OID643864193 
Producthypothetical protein 
Protein accessionYP_002880143 
Protein GI229818617 
COG category[S] Function unknown 
COG ID[COG3809] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.271016 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTGCC CGATCGACGA CTCGCCGCTC GTGATGACCG AGCGCTCGGG CATCGAGATC 
GACTACTGCC CGACGTGCCG TGGCGTCTGG CTCGACAGGG GCGAGCTCGA CAAGATCATC
GAGCGCGCCG CGCCCGGTGC CGGGACGAGC CTCCCGCCGC CCGTGCCCGA TCCGGCCGCC
CCCGGCCCGG GACCGGGACC CAGCCCGGCC GCGCCGCGGT ACGAGGAACC GTACGACCGG
CCCTACGACC AGCCCGGGTA CGAACCGCGC TTCGACGGTC GTGGCTACGA CCGCGGCTAC
GACCAGCGCG GCTACGGCGA GTCCTACGAC CCCCGGCGCG ACCCCCGCTC GCAGGACCCG
CGCTACCGGC GCAAGAAGAA GCGTGGCGGC TTCCTCGAGG ACCTGTTCGA CTTCGACTGA
 
Protein sequence
MKCPIDDSPL VMTERSGIEI DYCPTCRGVW LDRGELDKII ERAAPGAGTS LPPPVPDPAA 
PGPGPGPSPA APRYEEPYDR PYDQPGYEPR FDGRGYDRGY DQRGYGESYD PRRDPRSQDP
RYRRKKKRGG FLEDLFDFD