Gene Bcav_0105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0105 
Symbol 
ID7859270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp112870 
End bp113592 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content77% 
IMG OID643864182 
Productaminoglycoside phosphotransferase 
Protein accessionYP_002880132 
Protein GI229818606 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0510] Predicted choline kinase involved in LPS biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0679113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGGCG GAGCGGGTCG CCTCGCCTCT GCCGCGAACC TCCTCGGCCG CGGCCGCACG 
GCCGACGTCT ACGACCTGGG CGACGGCCTC GTGCTGCGTC GCTACCGCGA CGGCTACGAC
GCCGAGCGTG AGGCCGAGAT CCAGGCGCAC GTCGCCGAGC ACGGGTTCCC CGCGCCCGCG
GTGGTCGAGG CGCACGGACC CGACCTCGTG ATGGCCCGGG TGGCGGGCCC GACGATGCTC
GGAGCGCTGG TCGCCGGCGA CGCACGGCCC GACGAGGCCG CCCACCTCCT CGCGGACCTC
CACGACCGGC TGCACGCCCT GCCCGCACCT GCCGGCCCGC GCGAGCCGGG CGACGTCGTC
GTCCATCTCG ATCTGCATCC GGACAACGTC ATGCTCGACC CCGAGCGTGG GCCCGTGCTC
ATCGACTGGG CGAACGCGCG GCTCGGGACC GCCGACCTCG ACGTCGCGAT GACGGCGCTC
ATCCTCGCGG AGGTGGCGGT GGCACCGCCG GACTCGGAGC TCGCGGCCCA GGCCGGCCCG
GCCCTCGCGG CCGTGCCGGC GCTGGGAGCG GCGTTCCTCG CGGCGGTCGA CGGCGATGCC
CGGCTCGGCC TCGCGGGCGC TCTCGCGATG CGCGCGGCCA ACCCCACGCT GGACGCCGCC
GAGAAGGAGC GACTGTCCAC CGCCGTGCGC GCCGTGCGGG AGTGGGCCGA CGCCGCGGGC
TGA
 
Protein sequence
MSGGAGRLAS AANLLGRGRT ADVYDLGDGL VLRRYRDGYD AEREAEIQAH VAEHGFPAPA 
VVEAHGPDLV MARVAGPTML GALVAGDARP DEAAHLLADL HDRLHALPAP AGPREPGDVV
VHLDLHPDNV MLDPERGPVL IDWANARLGT ADLDVAMTAL ILAEVAVAPP DSELAAQAGP
ALAAVPALGA AFLAAVDGDA RLGLAGALAM RAANPTLDAA EKERLSTAVR AVREWADAAG