Gene Bcav_0103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0103 
Symbol 
ID7859268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp110837 
End bp112018 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content77% 
IMG OID643864180 
Producthistidine kinase 
Protein accessionYP_002880130 
Protein GI229818604 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.105504 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCCTC CGCAGGCCGC GCCGCCCGAC CGGACGTTCC CGGCGCGGCG GCTCACGGTG 
CCGACCCTGG TGCTCGGGTT CTTCACCGTG GCCGGCACCT GGGGCGCCCA CCGGTTCCAG
TCCGACGAGC GCTCGTTCGG CCTGGGCACC CTGGTGCTGG TCCTCGCCGT CGTCGCGTGC
CTCCCCCTCG CGGCCCGCCG CCCGCACATC GCGGCGCCGC TCGCCGTCGC CCTCACGCTC
GGCTACCTCG CGCTCGGATT CGCGCACGGC CCGATCCTGT TCGCCGCCGG CGTCGTGATC
GCGCTCGCGA CGGCGACCGG GCGACCACCG GTGGCGTACG CGTCGGCCGC CGCGTACGCC
GTCGGGTTCG TGGTGATCGC GGCGCTCCAG GACGGCGCAC CGACGTGGTC CGCCGCCGGC
GCCGCCCTGG CGTTCGGCGG GCTCCCGGTT CTCGTGGGCC TGCTCCTGCG CACGTGGCGG
GACCGGGCCA TGGCGCGGCG CGCTCTCCGC GCCGCGGAGG AACGCACGTC GCTCGCGGAC
GAACGCCTCC GCCTCGCGCG GGAGCTCCAC GACGTCCTCG CCCACTCGCT GTCCGCCATC
GCCGTGCAGG CGGGCGTCGC GGCGCACCTG CTCGACCGCG ACCCGGACCT CGCGCGGCGT
GCCCTCCTCG ACATCCGCAC GCAGAGCACC GAGTCGCTCG ACGAGGTGCG CTCGCTCATC
GGGATCCTGC GCGCCGACGG CGATGCGGAC GCGGGCGCCA GGGCACCGGG CGCCGACCTC
GACGCCATCC CCACGCTCGT CGAGCGCACC CGCGCAGGCG GCATCGCCGT CGACCTCGTG
CTCACGGTTC CCGACGGCGT CGCGGTGGCC GACGCCGTCT CGCGCGCCGC GTACCGGGTG
GTGCAGGAGG GGCTGACGAA CGTGCGGCGC CACTCCGCGG CTCGTGCGGC GCGCGTCCGC
GTCACCGGCG ACACGGCCGG GCTCACGATC TCCGTGCACG ACGGCGGGCC GCCCGCTGCG
GGAGAGTCGT CACCTGGGTC GTCGGCCGGC TGGGGCCTGC GCGGCATGCG CGAGCGGGTC
GAGCAGCTGG GCGGGACCGT CGAGGCCGGA CCCGACTCGG ACGGCGGATT CACGGTGCGC
GTGCGGCTCC CGTACGCGGC GGCGAGGGAG GGAACGTCAT GA
 
Protein sequence
MVPPQAAPPD RTFPARRLTV PTLVLGFFTV AGTWGAHRFQ SDERSFGLGT LVLVLAVVAC 
LPLAARRPHI AAPLAVALTL GYLALGFAHG PILFAAGVVI ALATATGRPP VAYASAAAYA
VGFVVIAALQ DGAPTWSAAG AALAFGGLPV LVGLLLRTWR DRAMARRALR AAEERTSLAD
ERLRLARELH DVLAHSLSAI AVQAGVAAHL LDRDPDLARR ALLDIRTQST ESLDEVRSLI
GILRADGDAD AGARAPGADL DAIPTLVERT RAGGIAVDLV LTVPDGVAVA DAVSRAAYRV
VQEGLTNVRR HSAARAARVR VTGDTAGLTI SVHDGGPPAA GESSPGSSAG WGLRGMRERV
EQLGGTVEAG PDSDGGFTVR VRLPYAAARE GTS