Gene Bcav_0093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0093 
Symbol 
ID7859258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp100822 
End bp101265 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content73% 
IMG OID643864170 
ProductEndoribonuclease L-PSP 
Protein accessionYP_002880120 
Protein GI229818594 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID[TIGR00004] endoribonuclease L-PSP, putative 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.248821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAGC AGACCAGCAC CGCAGCCGAC GCCGCACCGT CGAGCGGCGC GAAGGTGGCG 
ATCCTGACGT CGGACGCCCC GCCCCCCGCG CACACGTTCT CGCAGGGTGT GCGCAAGGGC
CCGATCCTGC AGGTGTCCGG GCAGGGGCCG GTGGACGCGG CCACCGGCGC GTACCGGCAC
CCCGGCGACG TCGCGGCGCA GACGACGCTC ACGCTGCGCA ACGTGAAGGC GATCGTCGAG
GCCGGGGGCG CCTCGTTCGC CGACGTCGTC ATGCTGCGCG TGTACCTGCG TCACGAGGGT
GACTTCGCGT CGATGAACGA GGCCTACGGC GCGTTCGTCG CGGAGCACGC GGGGGAGGTC
CTCCCGTCCC GGACGACCGT GTTCACCGGC CTGCCTCGGC CGGAGATGCT GGTGGAGATC
GACGCGCTCG CCGTCGTCGA CTGA
 
Protein sequence
MSEQTSTAAD AAPSSGAKVA ILTSDAPPPA HTFSQGVRKG PILQVSGQGP VDAATGAYRH 
PGDVAAQTTL TLRNVKAIVE AGGASFADVV MLRVYLRHEG DFASMNEAYG AFVAEHAGEV
LPSRTTVFTG LPRPEMLVEI DALAVVD