Gene Bcav_0092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0092 
Symbol 
ID7859257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp99423 
End bp100733 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content78% 
IMG OID643864169 
Productalanine racemase domain protein 
Protein accessionYP_002880119 
Protein GI229818593 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3616] Predicted amino acid aldolase or racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.342253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCACG CCTCGTCGAG CGACGCGCTC GGCACCACCC CGCCCCGCCT CGGCCCCGAG 
CACAAGTCGT TCCCGCCGCG TGCGTGGGGG CGGACGGCGG CCGGCGCCGG GCTCCGGCTG
CGGGACCTCG CCACGCCGGT GCTCACGCTC GACGCCGCCG CGCTCGAGCA CAACCTCGCC
ACGCTCGCCG CGTGGTGCGC CGAGCACGGC GTCGACCTCG CCCCGCACGG CAAGACGACG
ATGGCCCCGC AGCTGTGGCA CCGCCAGCTG GACGCCGGTG CGTGGGCCAT CACCGTCGCG
ACGCCGTGGC AGGCCCAGGT CGCCCGCGCG GCCGGCGTGC CGCGCATCCT GCTCGCGAAC
GCCCTCGTCG ACCCGGCCGG CATCGCCTGG GCCGCCTTCG CCGTCGCCGA CGACGCCGGC
CCCACCGAAC TCCTCAGCTG GGTCGACGGC GTCGACGGGG TGGCGCGCCT CGAGGACGCC
CTCGCCTCCC ACGGCGCACC CGTTCCGCTC GACGTGCTCG TCGAGCTCGG CACCGCCCGC
ACCGGGGCGC GCGGGGTCGA CGCGGCGCTC GCCGTCGCCG CCGCCGTGCG GCGCAGCCCC
CACCTGCGCC TCGCCGGCGT CGCGGGCTAC GAGGGTGCGG CGGCGCACGA CCGCTCCGAC
GAGGCGGTCG CCGCCGTCCG GGCGTACGTG GCCGACGTCG TCGCGCTCCA CGACGCGGTG
GACGGTTCGT ACGAGGTCCC GACGCCGGTG CTCACCCTGG GCGGGAGCGC GTTCCCCGAC
CTCGTGGTCG ACGGCGTCGC CGGCCTGCGC GACGGGGTGC GCGTGGTGCT GCGGTCCGGC
GCGTACGTGC TGCACGACGA CGGGTTCTAC GCCTCCGTCA CGCCGTTCGG GCGGGGCGCC
GCCGGGGGCG ACGTGCCGCT CCGCTCGGCG ATGCACGCCT GGGCGCGCGT CGTGTCCCGG
CCGGAGCGCG GCCTCGCGCT GCTCGACGCC GGCAAGCGCG ACGTCCCGTA CGACGAGGGG
CTGCCGACGC CGCAGCTCGT CGCCGGGGCG GGGGTGGTGG GGCGGGCGGC CCTGGCCGGG
GCGCACGTCT CGGCGCTCAA CGACCAGCAC GCGTTCCTGC GGCTGCCGCG CGACGACGCG
TGGGGCGCCG CCGACGACCC GCTCGGCGTC GGCGCCGTCG TCAGGCTCGG CCTGTCGCAC
CCGTGCACGG CGATGGACAA GTGGCGGCTC GTCCCCGTGG TCGTCGGCTC CGCCGACGAG
GATCCCGACC TCGACGCCCC GGTGACCGAC GCCGTCGCCA CCTACTTCTG A
 
Protein sequence
MAHASSSDAL GTTPPRLGPE HKSFPPRAWG RTAAGAGLRL RDLATPVLTL DAAALEHNLA 
TLAAWCAEHG VDLAPHGKTT MAPQLWHRQL DAGAWAITVA TPWQAQVARA AGVPRILLAN
ALVDPAGIAW AAFAVADDAG PTELLSWVDG VDGVARLEDA LASHGAPVPL DVLVELGTAR
TGARGVDAAL AVAAAVRRSP HLRLAGVAGY EGAAAHDRSD EAVAAVRAYV ADVVALHDAV
DGSYEVPTPV LTLGGSAFPD LVVDGVAGLR DGVRVVLRSG AYVLHDDGFY ASVTPFGRGA
AGGDVPLRSA MHAWARVVSR PERGLALLDA GKRDVPYDEG LPTPQLVAGA GVVGRAALAG
AHVSALNDQH AFLRLPRDDA WGAADDPLGV GAVVRLGLSH PCTAMDKWRL VPVVVGSADE
DPDLDAPVTD AVATYF